RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 A0A0X1KG70 313 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 C5orf63A6NC05 138 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 LRRC30A6NM36 301 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 F5H0A9 414 aaPredicted RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 SELENOFO60613 162 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 ANXA2P07355 339 aaKnown RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 ANOS1P23352 680 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 MZT1Q08AG7 82 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 APOFQ13790 326 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 OR8G1Q15617 311 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 LCN1P1Q5VSP4 162 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 SLC16A9Q7RTY1 509 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 MOGAT3Q86VF5 341 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 OR4M2Q8NGB6 313 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 ZNF420Q8TAQ5 688 aaPredicted RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 THEM6Q8WUY1 208 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 LRTOMTQ8WZ04 291 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
SS18-212ENST00000579061 AMELYQ99218 206 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 TEAD3Q99594 435 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
SS18-212ENST00000579061 TBX1O43435 398 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 ALOX5APP20292 161 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 CA6P23280 308 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 PMELP40967 661 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
SS18-212ENST00000579061 EFNB1P98172 346 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 FAM3AP98173 230 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 TIGD6Q17RP2 521 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 SLX4IPQ5VYV7 408 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 FAHD2BQ6P2I3 314 aaPredicted RBP12.47□□□□□ -0.41
SS18-212ENST00000579061 DEGS2Q6QHC5 323 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 CCDC121Q6ZUS5 278 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 BBS1Q8NFJ9 593 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 OR56B2PQ8NGI1 322 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 OR11L1Q8NGX0 322 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 TMEM158Q8WZ71 300 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 SGK3Q96BR1 496 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 FAHD2AQ96GK7 314 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 ADAT1Q9BUB4 502 aaKnown RBP12.47□□□□□ -0.41
SS18-212ENST00000579061 OSBPL10Q9BXB5 764 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 OR10A2Q9H208 303 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 N6AMT1Q9Y5N5 214 aa12.47□□□□□ -0.41
SS18-212ENST00000579061 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
SS18-212ENST00000579061 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 ZAR1LA6NP61 321 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 A8MXK9 166 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 PHF1O43189 567 aaPredicted RBP12.46□□□□□ -0.41
SS18-212ENST00000579061 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.41
SS18-212ENST00000579061 IRF2P14316 349 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.41
SS18-212ENST00000579061 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
SS18-212ENST00000579061 SNCBQ16143 134 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 DCAF12L2Q5VW00 463 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 C12orf73Q69YU5 71 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 FAM57BQ71RH2 274 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 ITFG2Q969R8 447 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 REEP6Q96HR9 211 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 TMPRSS13Q9BYE2 586 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 TMEM165Q9HC07 324 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 DNAJC27Q9NZQ0 273 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 MIOXQ9UGB7 285 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 ZNF391Q9UJN7 358 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 TMEM14AQ9Y6G1 99 aa12.46□□□□□ -0.41
SS18-212ENST00000579061 hCG_38984A0A1B0GV85 526 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 ACOD1A6NK06 481 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 ANKRD30BLA7E2S9 258 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 CEACAM18A8MTB9 384 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 PRKYO43930 277 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
SS18-212ENST00000579061 FAM20BO75063 409 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 WNT2P09544 360 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 DCTDP32321 178 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 PSMA6P60900 246 aaKnown RBP12.45□□□□□ -0.42
SS18-212ENST00000579061 ACTR3P61158 418 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 LCN2P80188 198 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 ZNF404Q494X3 552 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 ESCO2Q56NI9 601 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 NXNL2Q5VZ03 156 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 ZFP1Q6P2D0 407 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 KCTD18Q6PI47 426 aaPredicted RBP12.45□□□□□ -0.42
SS18-212ENST00000579061 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 TMEM163Q8TC26 289 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 PGAM5Q96HS1 289 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 C14orf119Q9NWQ9 140 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 H2AFY2Q9P0M6 372 aaPredicted RBP12.45□□□□□ -0.42
SS18-212ENST00000579061 ZNF319Q9P2F9 582 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms