RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RSPO1Q2MKA7 263 aaPredicted RBP10.95□□□□□ -0.66
COPS3-214ENST00000577246 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 SLC18B1Q6NT16 456 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 PGBD2Q6P3X8 592 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 CFAP77Q6ZQR2 320 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 PTCHD4Q6ZW05 846 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 KLHDC1Q8N7A1 406 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 BEND2Q8NDZ0 799 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 SLC26A10Q8NG04 563 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
COPS3-214ENST00000577246 ZNF799Q96GE5 643 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 KCNG2Q9UJ96 466 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 PRPF19Q9UMS4 504 aaKnown RBP10.95□□□□□ -0.66
COPS3-214ENST00000577246 MAB21L2Q9Y586 359 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 IER3IP1Q9Y5U9 82 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 DOCK11Q5JSL3 2073 aa10.95□□□□□ -0.66
COPS3-214ENST00000577246 IGLV1-36A0A0B4J1U3 117 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 J3KTA2 159 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 FFAR1O14842 300 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 PTP4A3O75365 173 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 RENP00797 406 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 CDKN2AP42771 156 aaKnown RBP10.94□□□□□ -0.66
COPS3-214ENST00000577246 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
COPS3-214ENST00000577246 BLMHQ13867 455 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 TBPL2Q6SJ96 375 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 LIAT1Q6ZQX7 453 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 C1orf122Q6ZSJ8 110 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 C11orf44Q8N8P7 122 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 OR4C15Q8NGM1 316 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 OR8S1Q8NH09 359 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 FAM46AQ96IP4 442 aaKnown RBP10.94□□□□□ -0.66
COPS3-214ENST00000577246 TSSK2Q96PF2 358 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 NPFFR1Q9GZQ6 430 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
COPS3-214ENST00000577246 AURKAIP1Q9NWT8 199 aaPredicted RBP10.94□□□□□ -0.66
COPS3-214ENST00000577246 GID8Q9NWU2 228 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 CYB5R1Q9UHQ9 305 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 B9D1Q9UPM9 204 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 FOXJ3Q9UPW0 622 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 AP3M1Q9Y2T2 418 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 NBEAL2Q6ZNJ1 2754 aa10.94□□□□□ -0.66
COPS3-214ENST00000577246 IGHV3OR15-7A0A075B7D8 119 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 ANKRD30BLA7E2S9 258 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 H3BUX3 64 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 M0R1W7 72 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 FXYD1O00168 92 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 IMPA2O14732 288 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 MRASO14807 208 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 TIPRLO75663 272 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 ZNF682O95780 498 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 TROVE2P10155 538 aaKnown RBP eCLIP10.93□□□□□ -0.66
COPS3-214ENST00000577246 DDOSTP39656 456 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 NAA10P41227 235 aaPredicted RBP10.93□□□□□ -0.66
COPS3-214ENST00000577246 ZNF92Q03936 586 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 MAPRE2Q15555 327 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 PCK2Q16822 640 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 RFX4Q33E94 735 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 WDR38Q5JTN6 314 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 AGBL2Q5U5Z8 902 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 DRAM2Q6UX65 266 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 ZNF826PQ6ZT77 177 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 FKBP9P1Q75LS8 142 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 VTCN1Q7Z7D3 282 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 NAA40Q86UY6 237 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 LINC00346Q8IVM7 164 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 OR51G2Q8NGK0 314 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 C8orf46Q8TAG6 207 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 SLC7A13Q8TCU3 470 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 LRRC29Q8WV35 223 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 RSRC1Q96IZ7 334 aaKnown RBP10.93□□□□□ -0.66
COPS3-214ENST00000577246 CCL13Q99616 98 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 DCTN5Q9BTE1 182 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 TOR3AQ9H497 397 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 SRA1Q9HD15 236 aaKnown RBP10.93□□□□□ -0.66
COPS3-214ENST00000577246 SIGLEC9Q9Y336 463 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
COPS3-214ENST00000577246 A0A1W2PRD5 423 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 A0A1W2PRF3 423 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 A0A1W2PRM7 423 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 A0A1W2PRQ8 180 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 NKX6-3A6NJ46 265 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 DCTN6O00399 190 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 FBXO24O75426 580 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 FCN3O75636 299 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 VSIG10L2P0DP72 767 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 ZNF823P16415 610 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 POU4F2Q12837 409 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 IKZF1Q13422 519 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 DGCR6Q14129 220 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 AANATQ16613 207 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 SMARCD3Q6STE5 483 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 NDUFA11Q86Y39 141 aa10.92□□□□□ -0.66
COPS3-214ENST00000577246 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms