RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 KMOO15229 486 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 GMDSO60547 372 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 OR2J3O76001 311 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 BRI3O95415 125 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 APOEP02649 317 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SERPINA5P05154 406 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 CD55P08174 381 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 UBCP0CG48 685 aaKnown RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 ATP1B2P14415 290 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 CD36P16671 472 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 GTF2E2P29084 291 aaKnown RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 UGT2B10P36537 528 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 CFHR2P36980 270 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 LIM2P55344 173 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SPCS3P61009 180 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 LCN2P80188 198 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 OGDHQ02218 1023 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 EXOSC2Q13868 293 aaKnown RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 CYTH1Q15438 398 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ZBTB6Q15916 424 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 KCTD19Q17RG1 926 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 DEFB115Q30KQ5 88 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SLC36A2Q495M3 483 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 OR2G6Q5TZ20 316 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 STUMQ69YW2 141 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 OR52W1Q6IF63 320 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 C3orf33Q6P1S2 294 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ALKAL1Q6UXT8 129 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 PEX26Q7Z412 305 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 HDDC2Q7Z4H3 204 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ZNF546Q86UE3 836 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 PHF13Q86YI8 300 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 CRLF3Q8IUI8 442 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 APRG1Q8IVJ8 170 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 MMGT1Q8N4V1 131 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 CLDN19Q8N6F1 224 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 PIH1D2Q8WWB5 315 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 RPL3LQ92901 407 aaKnown RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 C10orf35Q96D05 121 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ANKRD36BP1Q96IX9 119 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 CSPG4P5Q96PW8 444 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 IL4I1Q96RQ9 567 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 PRRT1Q99946 306 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 NICN1Q9BSH3 213 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 HES7Q9BYE0 225 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 RACGAP1Q9H0H5 632 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 KAT8Q9H7Z6 458 aaKnown RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 GPN2Q9H9Y4 310 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 STMN3Q9NZ72 180 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ERGIC3Q9Y282 383 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ZNF337Q9Y3M9 751 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 ALG6Q9Y672 507 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 COL11A1P12107 1806 aaPredicted RBP3.48□□□□□ -1.85
NUP88-213ENST00000576862 ZNF236Q9UL36 1845 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SMIM28A0A1B0GU29 152 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 CCDC182A6NF36 153 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 H3BN98 237 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 CLOCKO15516 846 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 HCRTO43612 131 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ZMPSTE24O75844 475 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 LSM8O95777 96 aaKnown RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 FGGP02679 453 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 PAEPP09466 180 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 GIMD1P0DJR0 217 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 UQCRBP14927 111 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KCNE1P15382 129 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ZNF7P17097 686 aaPredicted RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 DTYMKP23919 212 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 CD52P31358 61 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KDELR2P33947 212 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 AQP2P41181 271 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 RANBP1P43487 201 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 RGS6P49758 472 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 EMDP50402 254 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 DUSP3P51452 185 aaPredicted RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 EFNB2P52799 333 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 PLA2G16P53816 162 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KCNJ2P63252 427 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 BCL2L1Q07817 233 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 MGAT3Q09327 533 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 INCA1Q0VD86 236 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 PSG7Q13046 419 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 NAB1Q13506 487 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 GK3PQ14409 553 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 CDKN3Q16667 212 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ERI1Q8IV48 349 aaKnown RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 MFSD9Q8NBP5 474 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 INO80EQ8NBZ0 244 aaPredicted RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 OR2D3Q8NGH3 330 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 OR9A4Q8NGU2 314 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 LGALS14Q8TCE9 139 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ACTRT1Q8TDG2 376 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 RMND5BQ96G75 393 aaPredicted RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 SERPINB11Q96P15 392 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 OR5B2Q96R09 309 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ZNF184Q99676 751 aaPredicted RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 MRPL45Q9BRJ2 306 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms