RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZNF230Q9UIE0 474 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TNFSF18Q9UNG2 199 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 WNK3Q9BYP7 1800 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 ADAP1O75689 374 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 MT-CO2P00403 227 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TIMP1P01033 207 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 ARG1P05089 322 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 HTRA3P83110 453 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF345Q14585 488 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 DEFB133Q30KQ1 61 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAHD2BQ6P2I3 314 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 PATE1Q8WXA2 126 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 RSC1A1Q92681 617 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAHD2AQ96GK7 314 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 ALX4Q9H161 411 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 BCO1Q9HAY6 547 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 GCM1Q9NP62 436 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 A0A1W2PR64 198 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 GPANK1O95872 356 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC35A1P78382 337 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF684Q5T5D7 378 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM268Q5VZI3 342 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 GPX8Q8TED1 209 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 MED29Q9NX70 200 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 SPTBP11277 2137 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 PTGFRP43088 359 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 CRYBA2P53672 197 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 CCL4L1Q8NHW4 92 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF296Q8WUU4 475 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF775Q96BV0 537 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 MRPS24Q96EL2 167 aaKnown RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 CHST11Q9NPF2 352 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 C7orf77A4D0Y5 90 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 FTCDNL1E5RQL4 147 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 DAOP14920 347 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 CD1CP29017 333 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 HOXC8P31273 242 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR2A2Q6IF42 318 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 NPEPL1Q8NDH3 523 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TSLPQ969D9 159 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 SEC16AO15027 2179 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TRAV8-7A0A075B6U6 113 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 FIGNL2A6NMB9 653 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZFAND5O76080 213 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 CLDN1O95832 211 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 FGF2P09038 288 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TBXA2RP21731 343 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 PAX6P26367 422 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAM209BQ5JX69 171 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 ATOH1Q92858 354 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 PRO1933Q9H354 126 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 SERTAD4Q9NUC0 356 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 FBXL17Q9UF56 701 aa11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM184BQ9Y519 407 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB3-201ENST00000576222 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 H0Y8X5 98 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 HSPB6O14558 160 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ICOSLGO75144 302 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ALOX12BO75342 701 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 P04436 131 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 FGF7P21781 194 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 MITD1Q8WV92 249 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 TPSD1Q9BZJ3 242 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 BTBD17A6NE02 478 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR4C45A6NMZ5 311 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 SSSCA1O60232 199 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 HPP00738 406 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ST6GAL1P15907 406 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 GLRA1P23415 457 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZIC1Q15915 447 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 Q7L0L9 218 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZXDCQ2QGD7 858 aaPredicted RBP11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 PDLIM3Q53GG5 364 aaPredicted RBP11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC25A42Q86VD7 318 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF100Q8IYN0 542 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 FLRT3Q9NZU0 649 aa11.8□□□□□ -0.52
PCDHGB3-201ENST00000576222 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC25A4P12235 298 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 BCKDHBP21953 392 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 PCBD1P61457 104 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 DMRTC1Q5HYR2 192 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAM109BQ6ICB4 259 aaPredicted RBP11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 PLXDC2Q6UX71 529 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMPPEQ6ZT21 453 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms