RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM68Q96MH6 324 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CDCA3Q99618 268 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 FLRT3Q9NZU0 649 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 POLR1DQ9Y2S0 133 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ADAMTS20P59510 1910 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 A0A0B4J2E0 115 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 A0A1B0GX12 115 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 A6NCN8 305 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 SDCBPO00560 298 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 HEXBP07686 556 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF823P16415 610 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 EMP2P54851 167 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ZIC1Q15915 447 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 HAGHQ16775 308 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM31Q5JXX7 168 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 C10orf91Q5T1B1 145 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM225Q6GV28 225 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 SLC18B1Q6NT16 456 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 MR1Q95460 341 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CCDC3Q9BQI4 270 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 FGF22Q9HCT0 170 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM100Q9NV29 134 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 APOBEC3BQ9UH17 382 aaKnown RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 HHLA2Q9UM44 414 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CEP192Q8TEP8 1941 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 PRR32B1ATL7 298 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 C1QL1O75973 258 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 NSA2O95478 260 aaKnown RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 IGHV2-5P01817 119 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 JMJD7P0C870 316 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 FAM157CP0CG43 387 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 SULT1A2P50226 295 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 EMDP50402 254 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 SCAND1P57086 179 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CSNK2A1P68400 391 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CCINQ13939 588 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 MARCH3Q86UD3 253 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 BHLHE23Q8NDY6 225 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CSNK2A3Q8NEV1 391 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 OR51A2Q8NGJ7 313 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CCL4L1Q8NHW4 92 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 MARS2Q96GW9 593 aaKnown RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 RBM18Q96H35 190 aaKnown RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 C4orf45Q96LM5 186 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 NUDT9Q9BW91 350 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 PARP11Q9NR21 331 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF701Q9NV72 531 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 SERTAD3Q9UJW9 196 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 POMT1Q9Y6A1 747 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 F8VVB4 439 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 F8VWA3 439 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 H0YIZ8 118 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 EFSO43281 561 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 FGF7P21781 194 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 MST1LQ2TV78 715 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 RCBTB1Q8NDN9 531 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 HPSE2Q8WWQ2 592 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 RERGQ96A58 199 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 BMFQ96LC9 184 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 NMES1Q9C002 83 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 SMOC1Q9H4F8 434 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 KCNE5Q9UJ90 142 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 TIMM10BQ9Y5J6 103 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CELSR3Q9NYQ7 3312 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 RAB27BO00194 218 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 TRGC2P03986 189 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CD1AP06126 327 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 ALOX5APP20292 161 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF343Q6P1L6 599 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 OPN5Q6U736 354 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM182Q6ZP80 229 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-212ENST00000574799 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 NIPSNAP3BQ9BS92 247 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 CHST5Q9GZS9 411 aa8.57□□□□□ -1.04
CCDC40-212ENST00000574799 ASCC3Q8N3C0 2202 aaKnown RBP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 THADAQ6YHU6 1953 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 AK1P00568 194 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CSTBP04080 98 aaKnown RBP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 GLI4P10075 376 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CXCR1P25024 350 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 FHITP49789 147 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM33P57088 247 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 UBE2V2Q15819 145 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 GFI1BQ5VTD9 330 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 ZAR1Q86SH2 424 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 EXD3Q8N9H8 876 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 TCTN2Q96GX1 697 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF764Q96H86 408 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SNX22Q96L94 193 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 EHFQ9NZC4 300 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 EMC9Q9Y3B6 208 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 FLVCR1Q9Y5Y0 555 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms