RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GPR132Q9UNW8 380 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 SSX5O60225 188 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 FARS2O95363 451 aaKnown RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 IL11P20809 199 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 LAP3P28838 519 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 CLRN1P58418 232 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 C17orf67Q0P5P2 114 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ABHD12BQ7Z5M8 362 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 PNLDC1Q8NA58 520 aaKnown RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 RNF126Q9BV68 326 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 LPAR5Q9H1C0 372 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 RHBDD3Q9Y3P4 386 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ZNF878C9JN71 531 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 TAAR5O14804 337 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 WISP1O95388 367 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 TAS2R46P59540 309 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 SMCO1Q147U7 214 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 CLEC18BQ6UXF7 455 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ZNF768Q9H5H4 540 aaKnown RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 TMEM231Q9H6L2 316 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 B3GALT5Q9Y2C3 310 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 CHD7Q9P2D1 2997 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 CRTAPO75718 401 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ADCYAP1P18509 176 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ADH6P28332 368 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 SUMO3P55854 103 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 FBXW4P57775 412 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 STK11Q15831 433 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 FAM76BQ5HYJ3 339 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ARL5BQ96KC2 179 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 NICN1Q9BSH3 213 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ADAT1Q9BUB4 502 aaKnown RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 FOXQ1Q9C009 403 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 RHOFQ9HBH0 211 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ALKBH4Q9NXW9 302 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ATXN7L1Q9ULK2 861 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 C14orf166Q9Y224 244 aaKnown RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 CSNK2A1P68400 391 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 HSD11B2P80365 405 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 PDZK1IP1Q13113 114 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 C10orf91Q5T1B1 145 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 Q7L0L9 218 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 CSNK2A3Q8NEV1 391 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 AQP10Q96PS8 301 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SPACA5Q96QH8 159 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 C12orf57Q99622 126 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SDHAF3Q9NRP4 125 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 CYTL1Q9NRR1 136 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 VDAC3Q9Y277 283 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 CDC14BO60729 498 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 THEM4Q5T1C6 240 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 UEVLDQ8IX04 471 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SKA3Q8IX90 412 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 RRNAD1Q96FB5 475 aaKnown RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 CPNE2Q96FN4 548 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 BANF2Q9H503 90 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 C5orf66Q9H5L9 145 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SUSD2Q9UGT4 822 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SRPK3Q9UPE1 567 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 RPH3AQ9Y2J0 694 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 CEP290O15078 2479 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 IGKV1D-43A0A0B4J1Z2 117 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 MBTPS2O43462 519 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 MED6O75586 246 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 ADAP1O75689 374 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 ABOP16442 354 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 RBMXP38159 391 aaKnown RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SWI5Q1ZZU3 235 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 MRPL38Q96DV4 380 aaKnown RBP9.55□□□□□ -0.88
CCDC40-207ENST00000572253 EMC6Q9BV81 110 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SLC7A5P2Q9GIP4 190 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
CCDC40-207ENST00000572253 RP1P56715 2156 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 H0YIZ8 118 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 H3BML4 177 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 SOCS1O15524 211 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 SFTPBP07988 381 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 NME1P15531 152 aaKnown RBP9.54□□□□□ -0.88
CCDC40-207ENST00000572253 SLC6A9P48067 706 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 NPBWR1P48145 328 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 ZNF41P51814 821 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-207ENST00000572253 FOXK1P85037 733 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 C1orf189Q5VU69 101 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 S100A13Q99584 98 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 NRIP2Q9BQI9 281 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 ST6GALNAC5Q9BVH7 336 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 VN1R1Q9GZP7 353 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 OR10A2Q9H208 303 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 IFT22Q9H7X7 185 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 FN3KRPQ9HA64 309 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 PISDQ9UG56 409 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 TMEM131Q92545 1883 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 HTR3BO95264 441 aa9.54□□□□□ -0.88
CCDC40-207ENST00000572253 IGHG1P01857 330 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms