RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 RPL18Q07020 188 aaKnown RBP9.1□□□□□ -0.95
VPS53-207ENST00000570510 SCRN3Q0VDG4 424 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 LY6EQ16553 131 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 ALG10Q5BKT4 473 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 ARSJQ5FYB0 599 aaPredicted RBP9.1□□□□□ -0.95
VPS53-207ENST00000570510 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 OAFQ86UD1 273 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 SLC7A13Q8TCU3 470 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 DPF1Q92782 380 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 ERGIC1Q969X5 290 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 NKX3-1Q99801 234 aaPredicted RBP9.1□□□□□ -0.95
VPS53-207ENST00000570510 NPFFR1Q9GZQ6 430 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 PTTG3PQ9NZH4 202 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 KPTNQ9Y664 436 aa9.1□□□□□ -0.95
VPS53-207ENST00000570510 TRAV38-1A0A0B4J264 116 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 WI2-2373I1.2A0A1W2PRP0 233 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 AQP12BA6NM10 295 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 EFCAB9A8MZ26 197 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 H3BUX3 64 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 SGCEO43556 437 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 FAM20BO75063 409 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 PF4P02776 101 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 HLA-DPB1P04440 258 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 FABP3P05413 133 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 COX5BP10606 129 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 PF4V1P10720 104 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 CD28P10747 220 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 IFI30P13284 250 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 FAHP16930 419 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 TNFRSF1BP20333 461 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 MSR1P21757 451 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RGS6P49758 472 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 ERFP50548 548 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RAD23AP54725 363 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RPL27P61353 136 aaKnown RBP9.09□□□□□ -0.95
VPS53-207ENST00000570510 SLC35A2P78381 396 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 TOP3AQ13472 1001 aaPredicted RBP9.09□□□□□ -0.95
VPS53-207ENST00000570510 ZBED5Q49AG3 693 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 ARMC4Q5T2S8 1044 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RPL13AP3Q6NVV1 102 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 SYT9Q86SS6 491 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 DHFR2Q86XF0 187 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 AQP12AQ8IXF9 295 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 NRMQ8IXM6 262 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 PFN4Q8NHR9 129 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 PPP1R35Q8TAP8 253 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RASD2Q96D21 266 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 FUZQ9BT04 418 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
VPS53-207ENST00000570510 SIRT7Q9NRC8 400 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 C20orf141Q9NUB4 165 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 TAS2R1Q9NYW7 299 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 RNF7Q9UBF6 113 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 MAB21L2Q9Y586 359 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 U3KQK5 164 aa9.09□□□□□ -0.95
VPS53-207ENST00000570510 IGKV1D-43A0A0B4J1Z2 117 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 LGALS8O00214 317 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 IMPA2O14732 288 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 IDH3BO43837 385 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 PTP4A3O75365 173 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 CD14P08571 375 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
VPS53-207ENST00000570510 NCK1P16333 377 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 PMELP40967 661 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 AQP2P41181 271 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 C11orf91Q3C1V1 193 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 FAM98BQ52LJ0 330 aaKnown RBP9.08□□□□□ -0.96
VPS53-207ENST00000570510 TSEN54Q7Z6J9 526 aaKnown RBP9.08□□□□□ -0.96
VPS53-207ENST00000570510 ADCK1Q86TW2 530 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 OR51G2Q8NGK0 314 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 HDAC2Q92769 488 aaKnown RBP9.08□□□□□ -0.96
VPS53-207ENST00000570510 SSX3Q99909 188 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 CITED2Q99967 270 aaPredicted RBP9.08□□□□□ -0.96
VPS53-207ENST00000570510 DCTN5Q9BTE1 182 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 YY1AP1Q9H869 796 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 SMURF1Q9HCE7 757 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
VPS53-207ENST00000570510 A0A1W2PRX2 142 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 DVL1O14640 695 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 ARPC3O15145 178 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 MLNRO43193 412 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 NDUFB2O95178 105 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 GADD45GO95257 159 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 DUS4LO95620 317 aaKnown RBP9.07□□□□□ -0.96
VPS53-207ENST00000570510 TXNDC12O95881 172 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 GYPAP02724 150 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 SAA4P35542 130 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 GATA4P43694 442 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 OMPP47874 163 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 PRB3Q04118 309 aaPredicted RBP9.07□□□□□ -0.96
VPS53-207ENST00000570510 ECH1Q13011 328 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 DMRTC1Q5HYR2 192 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 PGM2L1Q6PCE3 622 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 SLC25A47Q6Q0C1 308 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
VPS53-207ENST00000570510 FBXW12Q6X9E4 464 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 DPY19L2P2Q6ZN68 376 aa9.07□□□□□ -0.96
VPS53-207ENST00000570510 ZDHHC21Q8IVQ6 265 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms