RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SPRY1O43609 319 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 FKBP6O75344 327 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 SOX14O95416 240 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PTBP3O95758 552 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 HLA-DQA2P01906 255 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 GYPBP06028 91 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PSMB10P40306 273 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PITPNBP48739 271 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 GNB2P62879 340 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 CRMP1Q14194 572 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 SLC9A3R2Q15599 337 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PCK2Q16822 640 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 SLC36A3Q495N2 470 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PGAP1Q75T13 922 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 OR2T33Q8NG76 320 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 OR2AJ1Q8NGZ0 328 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 TEX47Q8TBZ9 253 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF799Q96GE5 643 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 TSSK6Q9BXA6 273 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 PPP1R3EQ9H7J1 279 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 SMURF1Q9HCE7 757 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 KIR2DS1A0A191URI9 304 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 PPIAL4GP0DN37 164 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 GABPB1Q06547 395 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 BAMBIQ13145 260 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 CD300LDQ6UXZ3 194 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 DCXRQ7Z4W1 244 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 WDR86Q86TI4 376 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 FGFRL1Q8N441 504 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 LNX2Q8N448 690 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 CELF2-AS1Q8N7Q2 184 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 PAPD5Q8NDF8 572 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 PROKR2Q8NFJ6 384 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 FEVQ99581 238 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 NIPSNAP1Q9BPW8 284 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF556Q9HAH1 456 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 ARMC1Q9NVT9 282 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 PDP1Q9P0J1 537 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 DNAJB9Q9UBS3 223 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
GTF3C1-211ENST00000569653 WNK1Q9H4A3 2382 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 H3BN98 237 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 IFNGP01579 166 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 SFTPBP07988 381 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 PRKXP51817 358 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 TPTEP56180 551 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 FGF12P61328 243 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 OR8G1Q15617 311 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 SFRP4Q6FHJ7 346 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 DCDC5Q6ZRR9 648 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 SPATC1Q76KD6 591 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 MRPL21Q7Z2W9 205 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 OR8B3Q8NGG8 313 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 OR56B2PQ8NGI1 322 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 OR2T4Q8NH00 348 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 OR8B2Q96RD0 313 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 AMELYQ99218 206 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 ADAT1Q9BUB4 502 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 MED20Q9H944 212 aa11.5□□□□□ -0.57
GTF3C1-211ENST00000569653 A0A1B0GW55 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 RIIAD1A6NNX1 92 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 CLDN34H7C241 214 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 SPARCP09486 303 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L2P0CJ85 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L3P0CJ86 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L4P0CJ87 422 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L5P0CJ88 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L6P0CJ89 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L7P0CJ90 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 MMP9P14780 707 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF3P17036 446 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 SPI1P17947 270 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 C1orf146Q5VVC0 180 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4L9Q6RFH8 374 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 LRRN1Q6UXK5 716 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 PRSS45Q7RTY3 260 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 IQCF1Q8N6M8 205 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 BOLLQ8N9W6 283 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 SPRYD4Q8WW59 207 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 SLAMF6Q96DU3 332 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 ZMYND19Q96E35 227 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 TBX15Q96SF7 602 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms