RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 IGHV1-46P01743 117 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 GYPBP06028 91 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 SPARCP09486 303 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ANPEPP15144 967 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 CFPP27918 469 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 OTX1P32242 354 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 MAGEB1P43366 347 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 GPR6P46095 362 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 GGTLC2Q14390 218 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ALKBH6Q3KRA9 238 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 OTPQ5XKR4 325 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 DEGS2Q6QHC5 323 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 DPY19L4Q7Z388 723 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 PEG10Q86TG7 708 aaKnown RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ERI1Q8IV48 349 aaKnown RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 MAPK1IP1LQ8NDC0 245 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 OR8G5Q8NG78 346 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 RNF133Q8WVZ7 376 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ZNRF4Q8WWF5 429 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 RAB1CQ92928 201 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 SLAMF6Q96DU3 332 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF799Q96GE5 643 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 TEAD3Q99594 435 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 COPS4Q9BT78 406 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 GABARAPL1Q9H0R8 117 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 OPA3Q9H6K4 179 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 NIPAL2Q9H841 368 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 SAP30LQ9HAJ7 183 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 IL19Q9UHD0 177 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 ORC6Q9Y5N6 252 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 TMEM14AQ9Y6G1 99 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 COMMD3-BMI1R4GMX3 469 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 IGHV4-61A0A0C4DH41 118 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ACOD1A6NK06 481 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 FAM183AA6NL82 134 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 A8MV72 311 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF878C9JN71 531 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 CLUP10909 449 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 CFL1P23528 166 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 CPT2P23786 658 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 DDOSTP39656 456 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 SLC6A9P48067 706 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 RPS7P62081 194 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TNFAIP6P98066 277 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 EFNB1P98172 346 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 MZT1Q08AG7 82 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 EIF2B1Q14232 305 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 HLXQ14774 488 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 KPNB1Q14974 876 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 SNCBQ16143 134 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TSTQ16762 297 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 KLHL12Q53G59 568 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 LCN1P1Q5VSP4 162 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 SLX4IPQ5VYV7 408 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TMEM236Q5W0B7 351 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 OR2T2Q6IF00 324 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 USP51Q70EK9 711 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 Q71RC1 249 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 PGAP1Q75T13 922 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 CXXC5Q7LFL8 322 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 KLBQ86Z14 1044 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 SPERTQ8NA61 448 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 OR52H1Q8NGJ2 320 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 OTOSQ8NHW6 89 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ST7LQ8TDW4 575 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 SPRYD4Q8WW59 207 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TRUB1Q8WWH5 349 aaKnown RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ASB17Q8WXJ9 295 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 CCL17Q92583 94 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ERGIC1Q969X5 290 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 MNTQ99583 582 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 YIPF3Q9GZM5 350 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 RGCCQ9H4X1 137 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 MED20Q9H944 212 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 YAE1D1Q9NRH1 226 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF275Q9NSD4 429 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-219ENST00000569136 TMEM160Q9NX00 188 aa7.79□□□□□ -1.16
CAPN3-219ENST00000569136 FN1P02751 2386 aaKnown RBP7.78□□□□□ -1.16
CAPN3-219ENST00000569136 A0A1B0GWJ7 208 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 ZSCAN5BA6NJL1 495 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 ZAR1LA6NP61 321 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 IQCF6A8MYZ5 107 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 LYNX1G3V0Z9 82 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 XRCC2O43543 280 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 CDC14BO60729 498 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 MITFO75030 526 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF254O75437 659 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 RP2O75695 350 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 LYNP07948 512 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 IGHV4-31P0DP07 118 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 LYNX1P0DP58 116 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 ALOX5APP20292 161 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 PCMT1P22061 227 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 IGFBP5P24593 272 aa7.78□□□□□ -1.16
CAPN3-219ENST00000569136 SRP9P49458 86 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms