RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 RETNQ9HD89 108 aa1.16□□□□□ -2.22
BBS4-215ENST00000569001 KCNJ16Q9NPI9 418 aa1.16□□□□□ -2.22
BBS4-215ENST00000569001 TREX1Q9NSU2 369 aa1.16□□□□□ -2.22
BBS4-215ENST00000569001 DHCR7Q9UBM7 475 aaKnown RBP1.16□□□□□ -2.22
BBS4-215ENST00000569001 RHBDD3Q9Y3P4 386 aa1.16□□□□□ -2.22
BBS4-215ENST00000569001 COMMD3-BMI1R4GMX3 469 aa1.16□□□□□ -2.22
BBS4-215ENST00000569001 AHDC1Q5TGY3 1603 aaPredicted RBP1.15□□□□□ -2.22
BBS4-215ENST00000569001 IGKV2-24A0A0C4DH68 120 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 A0A0U1RQV1 116 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 A0A1W2PNN7 141 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 A0A1W2PPV4 95 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 FAM25EA8MYX2 175 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 SLC9A3R1O14745 358 aaPredicted RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 SOCS1O15524 211 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 GCM2O75603 506 aaPredicted RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 SEMA3DO95025 777 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 YIF1AO95070 293 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 FARS2O95363 451 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 LCA5LO95447 670 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 HLA-DPB1P04440 258 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 IVLP07476 585 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 ERGP11308 486 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 RAB5AP20339 215 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 USF1P22415 310 aaPredicted RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 TUBG1P23258 451 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 HTR1DP28221 377 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 LOXP28300 417 aaPredicted RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 MAS1LP35410 378 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 CEACAM6P40199 344 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 CSKP41240 450 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 GPR1P46091 355 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 CLDN6P56747 220 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 ZNF33AQ06730 810 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 CDH17Q12864 832 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 C5orf64Q2M2E5 130 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 TRMT5Q32P41 509 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 ADNP2Q6IQ32 1131 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 RWDD4Q6NW29 188 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 ZFP1Q6P2D0 407 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 C16orf87Q6PH81 154 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 ULK3Q6PHR2 472 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 SLC35D2Q76EJ3 337 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 VTCN1Q7Z7D3 282 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 HORMAD1Q86X24 394 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 VKORC1L1Q8N0U8 176 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 ZNF321PQ8N8H1 164 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 OR10AD1Q8NGE0 317 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 OR10W1Q8NGF6 305 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 OR8U1Q8NH10 309 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 C15orf40Q8WUR7 153 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 APH1BQ8WW43 257 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 RTN4IP1Q8WWV3 396 aaPredicted RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 RAB1CQ92928 201 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 DCPSQ96C86 337 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 ECHDC3Q96DC8 303 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 TEAD3Q99594 435 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 SLC7A5P2Q9GIP4 190 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 TOLLIPQ9H0E2 274 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 FBXO44Q9H4M3 255 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 DHX35Q9H5Z1 703 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 SYNDIG1Q9H7V2 258 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 MRM3Q9HC36 420 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 ACP6Q9NPH0 428 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 MED4Q9NPJ6 270 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 ZC4H2Q9NQZ6 224 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 PXMP2Q9NR77 195 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 CHRAC1Q9NRG0 131 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 TUBG2Q9NRH3 451 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 UVRAGQ9P2Y5 699 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 YARS2Q9Y2Z4 477 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 SBNO1A3KN83 1393 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 PALLDQ8WX93 1383 aa1.15□□□□□ -2.23
BBS4-215ENST00000569001 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.15□□□□□ -2.23
BBS4-215ENST00000569001 BRCA1P38398 1863 aaKnown RBP1.14□□□□□ -2.23
BBS4-215ENST00000569001 AQRO60306 1485 aaKnown RBP eCLIP1.14□□□□□ -2.235e-6■■■□□ 16.9
BBS4-215ENST00000569001 A0A0J9YXV3 536 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 A0A1B0GW55 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 H3BN98 237 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 TEX46H3BTG2 121 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DNASE2O00115 360 aaPredicted RBP1.14□□□□□ -2.23
BBS4-215ENST00000569001 NDUFS8O00217 210 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 NME4O00746 187 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 BPY2O14599 106 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 TAAR5O14804 337 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 SIVA1O15304 175 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 KDELR3O43731 214 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 HSBP1O75506 76 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 APCSP02743 223 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 GLAP06280 429 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 KLK1P06870 262 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 CD3GP09693 182 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DUX4L2P0CJ85 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DUX4L3P0CJ86 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DUX4L5P0CJ88 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DUX4L6P0CJ89 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 DUX4L7P0CJ90 424 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 PGA5P0DJD9 388 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 C1GALT1C1LP0DN25 315 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 GGT1P19440 569 aa1.14□□□□□ -2.23
BBS4-215ENST00000569001 CFHR2P36980 270 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms