RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 OR10H3O60404 316 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 GRPP07492 148 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L2P0CJ85 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L3P0CJ86 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L4P0CJ87 422 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L5P0CJ88 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L6P0CJ89 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L7P0CJ90 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 NOS3P29474 1203 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 BPIFB3P59826 476 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 GLYATQ6IB77 296 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4L9Q6RFH8 374 aaPredicted RBP12.83□□□□□ -0.36
NME3-211ENST00000568561 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 CYB561A3Q8NBI2 242 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 PKP2Q99959 881 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 RBM4BQ9BQ04 359 aaKnown RBP12.83□□□□□ -0.36
NME3-211ENST00000568561 MMP27Q9H306 513 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
NME3-211ENST00000568561 ABCD2Q9UBJ2 740 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 DUX4Q9UBX2 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 RNF114Q9Y508 228 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 GADD45GO95257 159 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 PTBP3O95758 552 aaKnown RBP12.82□□□□□ -0.36
NME3-211ENST00000568561 TSPAN15O95858 294 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 SLC2A1P11166 492 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.82□□□□□ -0.36
NME3-211ENST00000568561 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 HACD2Q6Y1H2 254 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 C1QL4Q86Z23 238 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 PNLDC1Q8NA58 520 aaKnown RBP12.82□□□□□ -0.36
NME3-211ENST00000568561 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 OR51L1Q8NGJ5 315 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 ST8SIA4Q92187 359 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 DYRK2Q92630 601 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 UBE2FQ969M7 185 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 SPTSSAQ969W0 71 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 TRIM15Q9C019 465 aa12.82□□□□□ -0.36
NME3-211ENST00000568561 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
NME3-211ENST00000568561 TRAV38-1A0A0B4J264 116 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 DVL1O14640 695 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 GMDSO60547 372 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 ZNF823P16415 610 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 PRKXP51817 358 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 PDCD1Q15116 288 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 OCLNQ16625 522 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 PROKR2Q8NFJ6 384 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 SLC22A4Q9H015 551 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 EGLN3Q9H6Z9 239 aa12.81□□□□□ -0.36
NME3-211ENST00000568561 NOP16Q9Y3C1 178 aaKnown RBP12.81□□□□□ -0.36
NME3-211ENST00000568561 A0A0G2JK05 382 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 TIMM23O14925 209 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 SEMG1P04279 462 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 LIPFP07098 398 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 IER3P46695 156 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 DLX1P56177 255 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 PROK1P58294 105 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 DCXRQ7Z4W1 244 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 VMO1Q7Z5L0 202 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 OR9Q1Q8NGQ5 310 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 SEH1LQ96EE3 360 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 COPS4Q9BT78 406 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
NME3-211ENST00000568561 ONECUT1Q9UBC0 465 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 COMMD3-BMI1R4GMX3 469 aa12.8□□□□□ -0.36
NME3-211ENST00000568561 A0A1W2PRD5 423 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 A0A1W2PRF3 423 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 A0A1W2PRM7 423 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 BHLHE40O14503 412 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 NDUFAB1O14561 156 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 CCDC22O60826 627 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 SPARCP09486 303 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 RRM2P31350 389 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 OTX1P32242 354 aaPredicted RBP12.79□□□□□ -0.36
NME3-211ENST00000568561 MSX2P35548 267 aaPredicted RBP12.79□□□□□ -0.36
NME3-211ENST00000568561 GSSP48637 474 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 CSNK2BP67870 215 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 TAF9Q16594 264 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 PCK2Q16822 640 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 PGBD2Q6P3X8 592 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 Q6ZSV7 163 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 LRRC29Q8WV35 223 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 CCL13Q99616 98 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 PPP1R3EQ9H7J1 279 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 TCF7L1Q9HCS4 588 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 SPAG4Q9NPE6 437 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms