RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SLC30A7Q8NEW0 376 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 OR52H1Q8NGJ2 320 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 OR1J2Q8NGS2 313 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 OR10AC1Q8NH08 325 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 C11orf40Q8WZ69 217 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DCUN1D4Q92564 292 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DVL3Q92997 716 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 NKD1Q969G9 470 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SPSB1Q96BD6 273 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF501Q96CX3 271 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 MRPS24Q96EL2 167 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 PGAM5Q96HS1 289 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 NARS2Q96I59 477 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 C2orf50Q96LR7 162 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ELF4Q99607 663 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SLC6A7Q99884 636 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DEFB126Q9BYW3 111 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CNTNAP3Q9BZ76 1288 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 NKX6-2Q9C056 277 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SELENOIQ9C0D9 397 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 TINAGL1Q9GZM7 467 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SLC26A1Q9H2B4 701 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CDCP1Q9H5V8 836 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 METTL8Q9H825 291 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SEC61A2Q9H9S3 476 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SLC39A1Q9NY26 324 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DHCR7Q9UBM7 475 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ANAPC10Q9UM13 185 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DOCK8Q8NF50 2099 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SCN2AQ99250 2005 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 TMEM131Q92545 1883 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 UTRNP46939 3433 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 BORCS7-ASMTA0A0B4J1R7 106 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 TRBV11-1A0A0K0K1C0 115 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 C2CD4DB7Z1M9 353 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 NPIPA2E9PIF3 369 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 F8VVB4 439 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 F8VWA3 439 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 NPIPA3F8WFD2 350 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 TOR1AO14656 332 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 BCAT2O15382 392 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 ATG12O94817 140 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 SIX6O95475 246 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 TTRP02766 147 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PRF1P14222 555 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 AKR1C4P17516 323 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 CD33P20138 364 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 MSR1P21757 451 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 S100GP29377 79 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 HRH1P35367 487 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PMELP40967 661 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 MAGEB1P43366 347 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 LUMP51884 338 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PCBD1P61457 104 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PPP1R1AQ13522 171 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF273Q14593 569 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 NR0B2Q15466 257 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 STK11Q15831 433 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PDSS1Q5T2R2 415 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 KCTD9Q7L273 389 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 CPEB2Q7Z5Q1 589 aaKnown RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 CD163Q86VB7 1156 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 SKA3Q8IX90 412 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 SPEM1Q8N4L4 309 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 OR51A2Q8NGJ7 313 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 OR13C9Q8NGT0 318 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 RNF138Q8WVD3 245 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 DNASE2BQ8WZ79 361 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 PIK3IP1Q96FE7 263 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 LINC00052Q96N35 136 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 AMELYQ99218 206 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 SF3B5Q9BWJ5 86 aaKnown RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 MRPL13Q9BYD1 178 aaKnown RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 NELFAQ9H3P2 528 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 RGCCQ9H4X1 137 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 WDR54Q9H977 334 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 MMP26Q9NRE1 261 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF629Q9UEG4 869 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 CGGBP1Q9UFW8 167 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 TMEM184BQ9Y519 407 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-250ENST00000568290 FLVCR1Q9Y5Y0 555 aa6.78□□□□□ -1.32
ATXN3-250ENST00000568290 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 A0A1B0GTH9 108 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 C13orf42A0A1B0GVH6 325 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 MEIS3P1A6NDR6 274 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 C9J4A7 227 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 LINC01387J3KSC0 135 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 SULT2B1O00204 365 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 RFXAPO00287 272 aa6.77□□□□□ -1.33
ATXN3-250ENST00000568290 RRP8O43159 456 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms