RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C19orf18Q8NEA5 215 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 DMRTB1Q96MA1 342 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 SP140LQ9H930 580 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 BEX1Q9HBH7 125 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 NDE1Q9NXR1 346 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 KAAG1Q9UBP8 84 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 CTSZQ9UBR2 303 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 BAIAP2Q9UQB8 552 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 LYVE1Q9Y5Y7 322 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 DOCK11Q5JSL3 2073 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 CENPVL3A0A0U1RRI6 287 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 FAM181BA6NEQ2 426 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 TNFRSF11BO00300 401 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 TOX4O94842 621 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 NDUFA7O95182 113 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 GRK5P34947 590 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 MSX2P35548 267 aaPredicted RBP12.43□□□□□ -0.42
RNF40-209ENST00000566703 SLC25A1P53007 311 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 TAF13Q15543 124 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 OR8B8Q15620 311 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 SFRP4Q6FHJ7 346 aaPredicted RBP12.43□□□□□ -0.42
RNF40-209ENST00000566703 DCXRQ7Z4W1 244 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 LNX2Q8N448 690 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 ZNRF4Q8WWF5 429 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 GATAD2BQ8WXI9 593 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 WDFY2Q96P53 400 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 PCGF1Q9BSM1 259 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 COPS4Q9BT78 406 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 MMADHCQ9H3L0 296 aaPredicted RBP12.43□□□□□ -0.42
RNF40-209ENST00000566703 TOR3AQ9H497 397 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 EGLN3Q9H6Z9 239 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 RNPEPL1Q9HAU8 725 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 C1orf123Q9NWV4 160 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 COMMD3-BMI1R4GMX3 469 aa12.43□□□□□ -0.42
RNF40-209ENST00000566703 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 ZNF593O00488 134 aaPredicted RBP12.42□□□□□ -0.42
RNF40-209ENST00000566703 ATP8B1O43520 1251 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 KNG1P01042 644 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 GASTP01350 101 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 GRPP07492 148 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 MELTFP08582 738 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 RPS27P42677 84 aaKnown RBP12.42□□□□□ -0.42
RNF40-209ENST00000566703 SLC15A1P46059 708 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 ENTPD1P49961 510 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 PRKXP51817 358 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 GRB2P62993 217 aaKnown RBP12.42□□□□□ -0.42
RNF40-209ENST00000566703 METTL11BQ5VVY1 283 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
RNF40-209ENST00000566703 C16orf89Q6UX73 402 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 RHOUQ7L0Q8 258 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 BOLLQ8N9W6 283 aaKnown RBP12.42□□□□□ -0.42
RNF40-209ENST00000566703 OR56B2PQ8NGI1 322 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 TBC1D15Q8TC07 691 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 SSMEM1Q8WWF3 244 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 SLAMF6Q96DU3 332 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 TBX15Q96SF7 602 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 NMNAT2Q9BZQ4 307 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 SIRPDQ9H106 197 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 ACOXLQ9NUZ1 547 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 TAGLN3Q9UI15 199 aa12.42□□□□□ -0.42
RNF40-209ENST00000566703 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 A6NLC8 198 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 ANKRD30BLA7E2S9 258 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 CCNB2O95067 398 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 APOC1P02654 83 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 SFTPBP07988 381 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 SPARCP09486 303 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 MUC1P15941 1255 aaPredicted RBP12.41□□□□□ -0.42
RNF40-209ENST00000566703 OMGP23515 440 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 CFL1P23528 166 aaKnown RBP12.41□□□□□ -0.42
RNF40-209ENST00000566703 MAGEA2P43356 314 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 RAG2P55895 527 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 FIP1L1Q6UN15 594 aaKnown RBP12.41□□□□□ -0.42
RNF40-209ENST00000566703 CPLX4Q7Z7G2 160 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 KIR3DL3Q8N743 410 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 OR9Q2Q8NGE9 314 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 OR51L1Q8NGJ5 315 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 OR8D4Q8NGM9 314 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 TSSK6Q9BXA6 273 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 CNTD2Q9H8S5 307 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 SMURF1Q9HCE7 757 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 ACTR3BQ9P1U1 418 aa12.41□□□□□ -0.42
RNF40-209ENST00000566703 CLPSL1A2RUU4 121 aa12.4□□□□□ -0.42
RNF40-209ENST00000566703 DVL1O14640 695 aa12.4□□□□□ -0.42
RNF40-209ENST00000566703 GPR37O15354 613 aa12.4□□□□□ -0.42
RNF40-209ENST00000566703 TIPRLO75663 272 aa12.4□□□□□ -0.42
RNF40-209ENST00000566703 IFNGP01579 166 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms