RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 LCATP04180 440 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 BMP5P22003 454 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 CFL1P23528 166 aaKnown RBP16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 IL32P24001 234 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 APEX1P27695 318 aaKnown RBP16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 SOX2P48431 317 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 MXD1Q05195 221 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 LSAMPQ13449 338 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF404Q494X3 552 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 FAM27D1Q5T7N8 215 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 COLCA1Q6ZS62 124 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 Q6ZSR3 168 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 NAA40Q86UY6 237 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 WDR31Q8NA23 367 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 PLPP7Q8NBV4 271 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 STEAP2Q8NFT2 490 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR51A4Q8NGJ6 313 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR51E1Q8TCB6 317 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 POM121L2Q96KW2 1035 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 TCF7L1Q9HCS4 588 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 GPR84Q9NQS5 396 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF275Q9NSD4 429 aaPredicted RBP16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF319Q9P2F9 582 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 FOXJ3Q9UPW0 622 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 N6AMT1Q9Y5N5 214 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 C2CD3Q4AC94 2353 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 CSMD1Q96PZ7 3565 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 A0A075B6Q4 140 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 LOC100509620A0A075B734 347 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 A0A1W2PPK0 400 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 SHISA3A0PJX4 238 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR5H1A6NKK0 313 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 XRCC2O43543 280 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 MTRF1O75570 445 aaKnown RBP16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 PSMD7P51665 324 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 TBC1D28Q2M2D7 210 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 TIMM23BQ5SRD1 257 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 STAC2Q6ZMT1 411 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 SSX8Q7RTT4 187 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF584Q8IVC4 421 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 MCFD2Q8NI22 146 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 AP3S1Q92572 193 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR10A4Q9H209 315 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 TPK1Q9H3S4 243 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 CKLFQ9UBR5 152 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 OTOGQ6ZRI0 2925 aa16.55■□□□□ 0.24
CSPG4P13-201ENST00000565545 LOC390937A0A1W2PQ73 354 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 C5orf49A4QMS7 147 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 DHRS7CA6NNS2 312 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 EEF1E1-BLOC1S5C9J1V9 151 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 J3QW42 95 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 EEF1E1O43324 174 aaKnown RBP16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 CLEC2LP0C7M8 214 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF14P17017 642 aaPredicted RBP16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 FSTP19883 344 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 RAB3BP20337 219 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 HNRNPA0Q13151 305 aaKnown RBP16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 TSC22D1Q15714 1073 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 XKRXQ6PP77 449 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 COMMD2Q86X83 199 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 PARP16Q8N5Y8 322 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLC30A7Q8NEW0 376 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 APOBEC3DQ96AK3 386 aaPredicted RBP16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 SGK3Q96BR1 496 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 C10orf35Q96D05 121 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZCCHC4Q9H5U6 513 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 CRNNQ9UBG3 495 aaPredicted RBP16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 PMF1-BGLAPU3KQ54 211 aa16.54■□□□□ 0.24
CSPG4P13-201ENST00000565545 F8P00451 2351 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 MEGF11A6BM72 1044 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 ANKRD61A6NGH8 418 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 DHRS3O75911 302 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 IGKV3-15P01624 115 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 MAGEB1P43366 347 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 HGFACQ04756 655 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 SNAI3Q3KNW1 292 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 C3orf36Q3SXR2 165 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 SERPINA12Q8IW75 414 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 AKAP1Q92667 903 aaKnown RBP eCLIP16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 V9GYS6 101 aa16.53■□□□□ 0.24
CSPG4P13-201ENST00000565545 NOTOA8MTQ0 251 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 ICMTO60725 284 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 IGFBP3P17936 291 aaPredicted RBP16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 DYNC1I2Q13409 638 aaKnown RBP16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 LIX1LQ8IVB5 337 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 RELL2Q8NC24 303 aaPredicted RBP16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR5L1Q8NGL2 311 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR5D14Q8NGL3 314 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR14K1Q8NGZ2 314 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 ACOT12Q8WYK0 555 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 SPSB4Q96A44 273 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 KCTD12Q96CX2 325 aaKnown RBP16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 REEP6Q96HR9 211 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 BARHL1Q9BZE3 327 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 OPA3Q9H6K4 179 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 CDH20Q9HBT6 801 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 TBCCD1Q9NVR7 557 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLC25A15Q9Y619 301 aa16.52■□□□□ 0.24
CSPG4P13-201ENST00000565545 PKDREJQ9NTG1 2253 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms