RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZNF230Q9UIE0 474 aaPredicted RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 HPCAL4Q9UM19 191 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 RRP15Q9Y3B9 282 aaKnown RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 ARHGAP31Q2M1Z3 1444 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 CDC42BPAQ5VT25 1732 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 SHANK1Q9Y566 2161 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 LRP6O75581 1613 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 STRCP1A6NGW2 1772 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 JCADQ9P266 1359 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 IGHV3-49A0A0A0MS15 119 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 A0A1W2PNN7 141 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 H7C1H1 209 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 PLXNC1O60486 1568 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 FLOT1O75955 427 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 ZFYVE9O95405 1425 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 PAHP00439 452 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 UQCRFS1P1P0C7P4 283 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SLC1A1P43005 524 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 TNNT2P45379 298 aaPredicted RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 PRKCDQ05655 676 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SRSF5Q13243 272 aaKnown RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 NCF4Q15080 339 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 PSMD5Q16401 504 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 YIF1BQ5BJH7 314 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SMIM5Q71RC9 77 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SLC22A9Q8IVM8 553 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 CBR4Q8N4T8 237 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 OR56B2PQ8NGI1 322 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 CAPSLQ8WWF8 208 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 ZNF606Q8WXB4 792 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SAMD10Q9BYL1 202 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 ANKRD60Q9BZ19 345 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 ZSCAN16Q9H4T2 348 aaPredicted RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 MYO5CQ9NQX4 1742 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 CCDC59Q9P031 241 aaKnown RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 REREQ9P2R6 1566 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SIGLEC7Q9Y286 467 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 CEP170BQ9Y4F5 1589 aaPredicted RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 PREX2Q70Z35 1606 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 SCAF11Q99590 1463 aaKnown RBP1.87□□□□□ -2.11
PALB2-203ENST00000565038 NLRP1Q9C000 1473 aa1.87□□□□□ -2.11
PALB2-203ENST00000565038 PREX1Q8TCU6 1659 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 ITSN2Q9NZM3 1697 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SCN1AP35498 2009 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 MED1Q15648 1581 aaPredicted RBP1.86□□□□□ -2.11
PALB2-203ENST00000565038 NAIPQ13075 1403 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 ADGRL3Q9HAR2 1447 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 IGHV1-69DA0A0B4J2H0 117 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 HEATR9A2RTY3 570 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 TRIM64CA6NLI5 447 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 RAD51CO43502 376 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SNX4O95219 450 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CT45A6P0DMU7 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CT45A5P0DMU8 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CT45A7P0DMV0 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 TALDO1P37837 337 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 TNFSF9P41273 254 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CRISP1P54107 249 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SEMG2Q02383 582 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SELENBP1Q13228 472 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 DMC1Q14565 340 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CT45A1Q5HYN5 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 C1orf185Q5T7R7 199 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 MBOAT2Q6ZWT7 520 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SLC16A14Q7RTX9 510 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CMC1Q7Z7K0 106 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SLC35G3Q8N808 338 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SNX31Q8N9S9 440 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 ZNF680Q8NEM1 530 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 OR7G2Q8NG99 324 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 OR1J4Q8NGS1 313 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 AKR7LQ8NHP1 331 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CT45A3Q8NHU0 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 OR51E1Q8TCB6 317 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 KLF14Q8TD94 323 aaPredicted RBP1.86□□□□□ -2.11
PALB2-203ENST00000565038 RNF145Q96MT1 663 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 PLA2G12AQ9BZM1 189 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 PKIBQ9C010 78 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 RETNQ9HD89 108 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 MYOZ1Q9NP98 299 aaPredicted RBP1.86□□□□□ -2.11
PALB2-203ENST00000565038 MED4Q9NPJ6 270 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 RHBDL2Q9NX52 303 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SLC17A7Q9P2U7 560 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 MROH1Q8NDA8 1641 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 IQSEC2Q5JU85 1478 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 C1orf167Q5SNV9 1468 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 DENND4AQ7Z401 1863 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SLIT1O75093 1534 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 CPS1P31327 1500 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 DUOX2Q9NRD8 1548 aa1.86□□□□□ -2.11
PALB2-203ENST00000565038 SYNMO15061 1565 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 CFAP74Q9C0B2 1584 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 INO80Q9ULG1 1556 aaPredicted RBP1.85□□□□□ -2.11
PALB2-203ENST00000565038 UTRNP46939 3433 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 SYCE1LA8MT33 242 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 CEACAM18A8MTB9 384 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 H0Y8G0 127 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms