RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 METTL8Q9H825 291 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SEC61A2Q9H9S3 476 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SLC39A1Q9NY26 324 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DHCR7Q9UBM7 475 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ANAPC10Q9UM13 185 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DOCK8Q8NF50 2099 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SCN2AQ99250 2005 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM131Q92545 1883 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 UTRNP46939 3433 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 BORCS7-ASMTA0A0B4J1R7 106 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 TRBV11-1A0A0K0K1C0 115 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 C2CD4DB7Z1M9 353 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 NPIPA2E9PIF3 369 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 F8VVB4 439 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 F8VWA3 439 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 NPIPA3F8WFD2 350 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 TOR1AO14656 332 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 BCAT2O15382 392 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 EFSO43281 561 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 ATG12O94817 140 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 SIX6O95475 246 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 TTRP02766 147 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 VSIG8P0DPA2 414 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PRF1P14222 555 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF16P17020 682 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 AKR1C4P17516 323 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 MSR1P21757 451 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 S100GP29377 79 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 HRH1P35367 487 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PMELP40967 661 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 MAGEB1P43366 347 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 LUMP51884 338 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PCBD1P61457 104 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PPP1R1AQ13522 171 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF273Q14593 569 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 NR0B2Q15466 257 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 STK11Q15831 433 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PDSS1Q5T2R2 415 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 KCTD9Q7L273 389 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 CPEB2Q7Z5Q1 589 aaKnown RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 CD163Q86VB7 1156 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 SKA3Q8IX90 412 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 SPEM1Q8N4L4 309 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 OR51A2Q8NGJ7 313 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 OR13C9Q8NGT0 318 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 RNF138Q8WVD3 245 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 DNASE2BQ8WZ79 361 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 PIK3IP1Q96FE7 263 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 LINC00052Q96N35 136 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 AMELYQ99218 206 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 SF3B5Q9BWJ5 86 aaKnown RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 MRPL13Q9BYD1 178 aaKnown RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 NELFAQ9H3P2 528 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 RGCCQ9H4X1 137 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 WDR54Q9H977 334 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 MMP26Q9NRE1 261 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF629Q9UEG4 869 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 CGGBP1Q9UFW8 167 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM184BQ9Y519 407 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-249ENST00000564606 FLVCR1Q9Y5Y0 555 aa6.78□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 A0A1B0GTH9 108 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 C13orf42A0A1B0GVH6 325 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 CDC14CA4D256 554 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 MEIS3P1A6NDR6 274 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 C9J4A7 227 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 LINC01387J3KSC0 135 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 SULT2B1O00204 365 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 RFXAPO00287 272 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 RRP8O43159 456 aaKnown RBP6.77□□□□□ -1.33
ATXN3-249ENST00000564606 FGF16O43320 207 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 CDC14BO60729 498 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 SCRG1O75711 98 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 CRTAPO75718 401 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-249ENST00000564606 DHRS3O75911 302 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 MPIG6BO95866 241 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 IFNA2P01563 188 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 CSTBP04080 98 aaKnown RBP6.77□□□□□ -1.33
ATXN3-249ENST00000564606 GAPDHP04406 335 aaKnown RBP6.77□□□□□ -1.33
ATXN3-249ENST00000564606 PGA4P0DJD7 388 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 PGA3P0DJD8 388 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 PTHLHP12272 177 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 LYL1P12980 280 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 ICAM2P13598 275 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 PGAM2P15259 253 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 ZNF17P17021 662 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 ZNF28P17035 718 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 DTYMKP23919 212 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 SERPINF1P36955 418 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 SLC6A9P48067 706 aa6.77□□□□□ -1.33
ATXN3-249ENST00000564606 CSNK1A1P48729 337 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms