RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FAM57AQ8TBR7 257 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 PLSCR4Q9NRQ2 329 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 CGGBP1Q9UFW8 167 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-208ENST00000563220 ATPIF1Q9UII2 106 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 PIEZO2Q9H5I5 2752 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 ARHGAP21Q5T5U3 1957 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 SLC17A2O00624 439 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 ATP6V1G1O75348 118 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 ARR3P36575 388 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 PER3P56645 1201 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 PLA2G7Q13093 441 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 CCBE1Q6UXH8 406 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-208ENST00000563220 ZNF584Q8IVC4 421 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 CMTM4Q8IZR5 234 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 GDPD1Q8N9F7 314 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 OR1M1Q8NGA1 313 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 OR13C9Q8NGT0 318 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 STARD4Q96DR4 205 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 SLC25A38Q96DW6 304 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 V9GYS6 101 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 GTF3C1Q12789 2109 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 A0A0G2JMP0 313 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 A0A0X1KG70 313 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 DHRS3O75911 302 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 LYZL6O75951 148 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 CGAP01215 116 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 COX5BP10606 129 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 CCL2P13500 99 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 BDKRB2P30411 391 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 C1orf185Q5T7R7 199 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 C3P1Q6ZMU1 363 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 OR4M2Q8NGB6 313 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 OR51D1Q8NGF3 324 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 OR52N4Q8NGI2 321 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 SLC25A28Q96A46 364 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 SNRNP40Q96DI7 357 aaKnown RBP15.69■□□□□ 0.1
COMMD4-208ENST00000563220 CMTM3Q96MX0 182 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 DOCK7Q96N67 2140 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 MRI1Q9BV20 369 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 NPAP1Q9NZP6 1156 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 ITGB1BP2Q9UKP3 347 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 RHBDD3Q9Y3P4 386 aa15.69■□□□□ 0.1
COMMD4-208ENST00000563220 FIGNL2A6NMB9 653 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 UBL3O95164 117 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 CNOT4O95628 575 aaKnown RBP15.68■□□□□ 0.1
COMMD4-208ENST00000563220 CSF3P09919 207 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 RAB3AP20336 220 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 PTBP1P26599 531 aaKnown RBP eCLIP15.68■□□□□ 0.1
COMMD4-208ENST00000563220 STOMP27105 288 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 PTGER4P35408 488 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 RIN1Q13671 783 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 RAB11BQ15907 218 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 PRR30Q53SZ7 412 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-208ENST00000563220 UBE2NLQ5JXB2 153 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 GLYATL3Q5SZD4 288 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 TMEM53Q6P2H8 277 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 AKAP14Q86UN6 197 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 NAXEQ8NCW5 288 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 REEP6Q96HR9 211 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 C1QTNF5Q9BXJ0 243 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 TMEM138Q9NPI0 162 aa15.68■□□□□ 0.1
COMMD4-208ENST00000563220 LOC390937A0A1W2PQ73 354 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 RAD51DO75771 328 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 IL7P13232 177 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 EDN3P14138 238 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TALDO1P37837 337 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TSC22D1Q15714 1073 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 C2orf76Q3KRA6 126 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 COLCA1Q6ZS62 124 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 RNF144BQ7Z419 303 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 OR5AS1Q8N127 324 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 ZNF610Q8N9Z0 462 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 POM121L2Q96KW2 1035 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 ZNF75AQ96N20 296 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 SLX1AQ9BQ83 275 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 KCNK15Q9H427 330 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TUBD1Q9UJT1 453 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TBC1D24Q9ULP9 559 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 C5orf49A4QMS7 147 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TMIGD3P0DMS9 266 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-208ENST00000563220 CCNOP22674 350 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 HTR2CP28335 458 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 PITPNBP48739 271 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 PRSS12P56730 875 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TGFBR3Q03167 851 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 TNK1Q13470 666 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 GABRA6Q16445 453 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 GSG1Q2KHT4 349 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 C1orf100Q5SVJ3 147 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 UNQ6494/PRO21346Q6UXR6 183 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 DPPA2Q7Z7J5 298 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 MDP1Q86V88 176 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 GABRG1Q8N1C3 465 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 JAGN1Q8N5M9 183 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 NKAIN3Q8N8D7 197 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 SYNPRQ8TBG9 265 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 FAM3DQ96BQ1 224 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 ABHD1Q96SE0 405 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms