RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 EXPH5Q8NEV8 1989 aa11.6□□□□□ -0.55
USB1-207ENST00000563149 LOC100509620A0A075B734 347 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 IGHV3-20A0A0C4DH32 117 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 EEF1E1-BLOC1S5C9J1V9 151 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 CDC14BO60729 498 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 SFT2D2O95562 160 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 PMP2P02689 132 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 LYL1P12980 280 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 SERPINF1P36955 418 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 GABREP78334 506 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 ZNF169Q14929 603 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 PLPPR5Q32ZL2 321 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 BEX5Q5H9J7 111 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 ATRAIDQ6UW56 229 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 DOK3Q7L591 496 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 OR5AS1Q8N127 324 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 SLC30A7Q8NEW0 376 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 OR6X1Q8NH79 312 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 MARCH1Q8TCQ1 289 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 RAB3CQ96E17 227 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
USB1-207ENST00000563149 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 H3BML4 177 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 EFNA2O43921 213 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 ZNF354AO60765 605 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 FPR2P25090 351 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 GRB2P62993 217 aaKnown RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 DEFA5Q01523 94 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 MYBPHQ13203 477 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 ATXN7L3Q14CW9 347 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 MICBQ29980 383 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 SLC22A6Q4U2R8 563 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 C16orf47Q6ZP98 133 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 PEG10Q86TG7 708 aaKnown RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 ARMC10Q8N2F6 343 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 GTPBP8Q8N3Z3 284 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 PMEPA1Q969W9 287 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 RELTQ969Z4 430 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 TMEM41AQ96HV5 264 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 C1orf147Q96MC9 270 aaPredicted RBP11.59□□□□□ -0.55
USB1-207ENST00000563149 OXGR1Q96P68 337 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 TMEM100Q9NV29 134 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 POLR1DQ9Y2S0 133 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 CSAG2Q9Y5P2 127 aa11.59□□□□□ -0.55
USB1-207ENST00000563149 ADAMTS9Q9P2N4 1935 aa11.58□□□□□ -0.55
USB1-207ENST00000563149 A0A0A6YYD4 124 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 LOC102725191A0A1B0GVB3 256 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 SMAD9O15198 467 aaKnown RBP11.58□□□□□ -0.56
USB1-207ENST00000563149 ATG12O94817 140 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 MPIG6BO95866 241 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 CD79AP11912 226 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 NR2C1P13056 603 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 PGAM2P15259 253 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 CTSSP25774 331 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 P2RY4P51582 365 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 ACY1Q03154 408 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 STK11Q15831 433 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 PDSS1Q5T2R2 415 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 SHISA6Q6ZSJ9 500 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 BAP18Q8IXM2 172 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 OR8B12Q8NGG6 310 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 SSC4DQ8WTU2 575 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 SLC25A43Q8WUT9 341 aaPredicted RBP11.58□□□□□ -0.56
USB1-207ENST00000563149 RNF141Q8WVD5 230 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 DCUN1D4Q92564 292 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 NICN1Q9BSH3 213 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 SEC61A2Q9H9S3 476 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 PCDHB16Q9NRJ7 776 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 PCDHB10Q9UN67 800 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 FLVCR1Q9Y5Y0 555 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 B3GALT1Q9Y5Z6 326 aa11.58□□□□□ -0.56
USB1-207ENST00000563149 TRBV11-1A0A0K0K1C0 115 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 C13orf42A0A1B0GVH6 325 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 MFNGO00587 321 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
USB1-207ENST00000563149 ZFAND5O76080 213 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 ABOP16442 354 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 ADH6P28332 368 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 PTGDSP41222 190 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 SLC6A9P48067 706 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 TMEM50BP56557 158 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 ZNF121P58317 390 aaPredicted RBP11.57□□□□□ -0.56
USB1-207ENST00000563149 HIST3H3Q16695 136 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
USB1-207ENST00000563149 PABPC1L2AQ5JQF8 200 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 PLAC9Q5JTB6 97 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 RTL6Q6ICC9 239 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
USB1-207ENST00000563149 PRSS54Q6PEW0 395 aa11.57□□□□□ -0.56
USB1-207ENST00000563149 ABHD12BQ7Z5M8 362 aaPredicted RBP11.57□□□□□ -0.56
USB1-207ENST00000563149 LHFPL1Q86WI0 220 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms