RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 GOLGA8OA6NCC3 632 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 ZNF878C9JN71 531 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 GOLGA8NF8WBI6 632 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 M0R3G1 203 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 SCELO95171 688 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 AGTP01019 485 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 PFN1P07737 140 aaKnown RBP1.3□□□□□ -2.2
CHD9-207ENST00000562806 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 TRDNQ13061 729 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 ZNF266Q14584 549 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 IHHQ14623 411 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 CHRNA6Q15825 494 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 KLHL12Q53G59 568 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 ARMC12Q5T9G4 340 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 CARD17Q5XLA6 110 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 HCP5Q6MZN7 132 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 DEGS2Q6QHC5 323 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 TMEM136Q6ZRR5 245 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 SCD5Q86SK9 330 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 OR2Z1Q8NG97 314 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 OR9G4Q8NGQ1 327 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 MCUR1Q96AQ8 359 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 C8orf44Q96CB5 159 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 RNF145Q96MT1 663 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 GPR82Q96P67 336 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 PDCD1LG2Q9BQ51 273 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 SEC22CQ9BRL7 303 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 TMEM38AQ9H6F2 299 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 RRAGDQ9NQL2 400 aaPredicted RBP1.3□□□□□ -2.2
CHD9-207ENST00000562806 CLN6Q9NWW5 311 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 CLN8Q9UBY8 286 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.3□□□□□ -2.2
CHD9-207ENST00000562806 SEC16AO15027 2179 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 K7EMT4 169 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 LSM1O15116 133 aaKnown RBP1.29□□□□□ -2.2
CHD9-207ENST00000562806 OR2F2O95006 317 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 MAS1P04201 325 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 RAB4AP20338 218 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 GTF2E2P29084 291 aaKnown RBP1.29□□□□□ -2.2
CHD9-207ENST00000562806 OR1E1P30953 314 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 APLNRP35414 380 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 C21orf59P57076 290 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 TAS2R43P59537 309 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 HMGN5P82970 282 aaKnown RBP1.29□□□□□ -2.2
CHD9-207ENST00000562806 SELENBP1Q13228 472 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 ZNF829Q3KNS6 432 aaPredicted RBP1.29□□□□□ -2.2
CHD9-207ENST00000562806 SMARCD3Q6STE5 483 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 OPN5Q6U736 354 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 SSX9Q7RTT3 188 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 HORMAD1Q86X24 394 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 JAGN1Q8N5M9 183 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 OR52N1Q8NH53 320 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 RXFP4Q8TDU9 374 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 DCAKDQ8WVC6 231 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 YIPF5Q969M3 257 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 PRRC1Q96M27 445 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 ZFP3Q96NJ6 502 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 CHP1Q99653 195 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 NUDT9Q9BW91 350 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 ACTR3CQ9C0K3 210 aaPredicted RBP1.29□□□□□ -2.2
CHD9-207ENST00000562806 RGS18Q9NS28 235 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 HPCAL4Q9UM19 191 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 LRRC42Q9Y546 428 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 ZBED9Q6R2W3 1325 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 ADGRA3Q8IWK6 1321 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 NLRC5Q86WI3 1866 aa1.29□□□□□ -2.2
CHD9-207ENST00000562806 A0A1W2PNN7 141 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 ISPDA4D126 451 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 C4orf51C9J302 202 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 H7C1H1 209 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 MPHOSPH10O00566 681 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 CCNB2O95067 398 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 NELFEP18615 380 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 RAB5AP20339 215 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 BCKDHBP21953 392 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 USF1P22415 310 aaPredicted RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 CALRP27797 417 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 HMOX2P30519 316 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 POLR2IP36954 125 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 TAGLN2P37802 199 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 HADHQ16836 314 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 TMEM69Q5SWH9 247 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 STUMQ69YW2 141 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 RWDD4Q6NW29 188 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 C12orf54Q6X4T0 127 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 Q6ZSR6 202 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 CBLN2Q8IUK8 224 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 ORMDL3Q8N138 153 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 RNF10Q8N5U6 811 aaKnown RBP1.28□□□□□ -2.2
CHD9-207ENST00000562806 FAM81AQ8TBF8 368 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 MARVELD1Q9BSK0 173 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 SFXN3Q9BWM7 321 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 ZNF160Q9HCG1 818 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 RETNQ9HD89 108 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 SCN4AP35499 1836 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 ANKRD12Q6UB98 2062 aa1.28□□□□□ -2.2
CHD9-207ENST00000562806 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CHD9-207ENST00000562806 PCDH11XQ9BZA7 1347 aa1.27□□□□□ -2.21
CHD9-207ENST00000562806 KBTBD11-OT1A0A1B0GTJ5 212 aa1.27□□□□□ -2.21
CHD9-207ENST00000562806 TSPAN11A1L157 253 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms