RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 FAM60AQ9NP50 221 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 PRODH2Q9UF12 536 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF724A8MTY0 619 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF727A8MUV8 499 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 TNFRSF10CO14798 259 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 THBS1P07996 1170 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 SPARCP09486 303 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 HKR1P10072 659 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 CD200P41217 278 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 TSPAN7P41732 249 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 CX3CR1P49238 355 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 FZD2Q14332 565 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF343Q6P1L6 599 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 PRSS54Q6PEW0 395 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 NAXEQ8NCW5 288 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 OR51F2Q8NH61 342 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF417Q8TAU3 575 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ADAMTS15Q8TE58 950 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF764Q96H86 408 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 PRRT1Q99946 306 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ZFYVE21Q9BQ24 234 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 KLK13Q9UKR3 277 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 DAPP1Q9UN19 280 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 WDR45Q9Y484 360 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 LOC100289279A0A1B0GTE1 492 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 SMCO3A2RU48 225 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 EFSO43281 561 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 CXCL1P09341 107 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 YPEL5P62699 121 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 RAB11BQ15907 218 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 OR2T2Q6IF00 324 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 TM4SF19Q96DZ7 209 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 PILRAQ9UKJ1 303 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 URGCP-MRPS24S4R325 110 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 A0A087WV62 115 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 NPIPA5A0A0B4J1W7 369 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 TRBV5-5A0A0J9YX44 114 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 SPTY2D1-AS1A0A0U1RR47 76 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 NPIPA7E9PJI5 369 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 STK17BO94768 372 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 NPIPA8P0DM63 369 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 TACR3P29371 465 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF616Q08AN1 781 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 LRRC25Q8N386 305 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 GRHL3Q8TE85 626 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 RERGQ96A58 199 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 NMNAT3Q96T66 252 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 SCRT1Q9BWW7 348 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 GOLT1BQ9Y3E0 138 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 PCDH15Q96QU1 1955 aa12.53□□□□□ -0.4
GTF3C1-203ENST00000562609 FITM1A5D6W6 292 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 B3GALT2O43825 422 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 FGF17O60258 216 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF432O94892 652 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 LYPD3O95274 346 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 TRGC2P03986 189 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 F13BP05160 661 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 FGF7P21781 194 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 RABIFP47224 123 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 GNG10P50151 68 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 HHEXQ03014 270 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 FAM220AQ7Z4H9 259 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF676Q8N7Q3 588 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 MTHFD2LQ9H903 347 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 OR14J1Q9UGF5 321 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 COL4A2P08572 1712 aa12.52□□□□□ -0.4
GTF3C1-203ENST00000562609 ARID1AO14497 2285 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 HTR2CP28335 458 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 KIAA0895LQ68EN5 471 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 OR14K1Q8NGZ2 314 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 ZPLD1Q8TCW7 415 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 Q8WTZ3 238 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 BSCL2Q96G97 398 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC2A8Q9NY64 477 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms