RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HSD17B1P14061 328 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IFNGR2P38484 337 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DRAM2Q6UX65 266 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DCXRQ7Z4W1 244 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 FAM90A1Q86YD7 464 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 TMEM86BQ8N661 226 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GCSAMQ8N6F7 178 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR4F5Q8NH21 305 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 MCUR1Q96AQ8 359 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ELAC2Q9BQ52 826 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SIRPDQ9H106 197 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 BEX1Q9HBH7 125 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IL1RAPQ9NPH3 570 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CD300AQ9UGN4 299 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CDH10Q9Y6N8 788 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 COMMD3-BMI1R4GMX3 469 aa13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PRKDCP78527 4128 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 A0A1B0GUS0 222 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ARPC2O15144 300 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 NDUFA7O95182 113 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GYPAP02724 150 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CRYBA1P05813 215 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GRPP07492 148 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SLC2A1P11166 492 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OLFML2AQ68BL7 652 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 LNX2Q8N448 690 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PNLDC1Q8NA58 520 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR9Q2Q8NGE9 314 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR56B2PQ8NGI1 322 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GATAD2BQ8WXI9 593 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 FAM71F1Q96KD3 344 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 NSMCE2Q96MF7 247 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CITED1Q99966 193 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 BTBD10Q9BSF8 475 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ACOXLQ9NUZ1 547 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 KIF17Q9P2E2 1029 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 POMT1Q9Y6A1 747 aa13.81□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IGHV1-69DA0A0B4J2H0 117 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 NDUFA2O43678 99 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 LHBP01229 141 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IGHV1-69P01742 117 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PRKXP51817 358 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 KRTAP10-3P60369 221 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 POU4F2Q12837 409 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OCLNQ16625 522 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PCK2Q16822 640 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 MIDNQ504T8 468 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 TEX36Q5VZQ5 186 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 C17orf107Q6ZR85 190 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 WDR86Q86TI4 376 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ZDHHC21Q8IVQ6 265 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 FGFRL1Q8N441 504 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SLC37A3Q8NCC5 494 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR52L1Q8NGH7 329 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 LHX4Q969G2 390 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SLAMF6Q96DU3 332 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 COPS4Q9BT78 406 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 TRIM36Q9NQ86 728 aa13.8□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IGHV3OR15-7A0A075B7D8 119 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 A0A1B0GW55 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CLPSL1A2RUU4 121 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 A6NLC8 198 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DVL1O14640 695 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GYPBP06028 91 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SPARCP09486 303 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 HMGA2P52926 109 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ARF6P62330 175 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ELF3P78545 371 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PDCD1Q15116 288 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 HSP90B2PQ58FF3 399 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ZNF770Q6IQ21 691 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 RPL13AP3Q6NVV1 102 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 BTN2A1Q7KYR7 527 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 C11orf53Q8IXP5 236 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SPERTQ8NA61 448 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ZNF511Q8NB15 262 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SSMEM1Q8WWF3 244 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SPSB4Q96A44 273 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 IL20Q9NYY1 176 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 KAAG1Q9UBP8 84 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 N6AMT1Q9Y5N5 214 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 LYVE1Q9Y5Y7 322 aa13.79□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 A0A0U1RQK1 487 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 hCG_1807616A0A1W2PRN6 198 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 GASTP01350 101 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms