RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 COLCA1Q6ZS62 124 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 GCNT2Q8N0V5 402 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 C1orf162Q8NEQ5 155 aaPredicted RBP14.91□□□□□ -0.02
HDDC3-206ENST00000561036 OR4M2Q8NGB6 313 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 SYNPRQ8TBG9 265 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 FAM57AQ8TBR7 257 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 AKAP1Q92667 903 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDDC3-206ENST00000561036 PTX4Q96A99 478 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 HAVCR1Q96D42 359 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 REEP6Q96HR9 211 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 METTL17Q9H7H0 456 aaPredicted RBP14.91□□□□□ -0.02
HDDC3-206ENST00000561036 RHBDL2Q9NX52 303 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 ARHGAP21Q5T5U3 1957 aa14.91□□□□□ -0.02
HDDC3-206ENST00000561036 OCMP0CE72 109 aaPredicted RBP14.9□□□□□ -0.02
HDDC3-206ENST00000561036 ABOP16442 354 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 ANOS1P23352 680 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 ID4P47928 161 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 MMP15P51511 669 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 HGFACQ04756 655 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 ASAH1Q13510 395 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 C2orf76Q3KRA6 126 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 TBRG1Q3YBR2 411 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 JAGN1Q8N5M9 183 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 CNEP1R1Q8N9A8 125 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 OR13C9Q8NGT0 318 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 SPSB4Q96A44 273 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 SOX7Q9BT81 388 aa14.9□□□□□ -0.02
HDDC3-206ENST00000561036 APC2O95996 2303 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 MED12LQ86YW9 2145 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 MAGEB3O15480 346 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 ZNHIT1O43257 154 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 GSTZ1O43708 216 aaPredicted RBP14.89□□□□□ -0.03
HDDC3-206ENST00000561036 SERPINA5P05154 406 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 TPOP07202 933 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 PRF1P14222 555 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 COX5AP20674 150 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 IGHV1-2P23083 117 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 STOMP27105 288 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 TIMP3P35625 211 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 MAP2K3P46734 347 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 POU3F4P49335 361 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 CXADRP78310 365 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 RIPPLY1Q0D2K3 151 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 GSG1Q2KHT4 349 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 ZBTB37Q5TC79 503 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 OR5AS1Q8N127 324 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 Q8NA96 180 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 C19orf18Q8NEA5 215 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 SEMA6DQ8NFY4 1073 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 OR51D1Q8NGF3 324 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 OR52N4Q8NGI2 321 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 ABHD1Q96SE0 405 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 CHST5Q9GZS9 411 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 NEK6Q9HC98 313 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 CGGBP1Q9UFW8 167 aaPredicted RBP14.89□□□□□ -0.03
HDDC3-206ENST00000561036 TBC1D24Q9ULP9 559 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 RHBDD3Q9Y3P4 386 aa14.89□□□□□ -0.03
HDDC3-206ENST00000561036 LOC100509620A0A075B734 347 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF503-AS2A6NEH8 195 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 LDLRAD4O15165 306 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 BPNT1O95861 308 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 CGAP01215 116 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 ARSBP15848 533 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 RAB6AP20340 208 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 TDGF1P3P51864 188 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 PER3P56645 1201 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 MRPS10P82664 201 aaKnown RBP14.88□□□□□ -0.03
HDDC3-206ENST00000561036 P2RY6Q15077 328 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 HIKESHIQ53FT3 197 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 RTL6Q6ICC9 239 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 SEM1Q6ZVN7 128 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 APOBEC3DQ96AK3 386 aaPredicted RBP14.88□□□□□ -0.03
HDDC3-206ENST00000561036 POM121L2Q96KW2 1035 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 NOX3Q9HBY0 568 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 TBCCD1Q9NVR7 557 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 LUZP4Q9P127 313 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 FBLN5Q9UBX5 448 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 PROCRQ9UNN8 238 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 PIGLQ9Y2B2 252 aa14.88□□□□□ -0.03
HDDC3-206ENST00000561036 A0A0A6YYH2 397 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 TMEM272A0A1B0GTI8 110 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 A6NIN4 97 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 A6NJ64 397 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 XRCC3O43542 346 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 TNFSF13O75888 250 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 TMIGD3P0DMS9 266 aaPredicted RBP14.87□□□□□ -0.03
HDDC3-206ENST00000561036 APLNRP35414 380 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF93P35789 620 aaPredicted RBP14.87□□□□□ -0.03
HDDC3-206ENST00000561036 UBE2NP61088 152 aaKnown RBP14.87□□□□□ -0.03
HDDC3-206ENST00000561036 GABRA6Q16445 453 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 VWA1Q6PCB0 445 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 CD163Q86VB7 1156 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 SSC4DQ8WTU2 575 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 RFT1Q96AA3 541 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 STARD4Q96DR4 205 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 SLX1AQ9BQ83 275 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 THAP7Q9BT49 309 aaPredicted RBP14.87□□□□□ -0.03
HDDC3-206ENST00000561036 OPA3Q9H6K4 179 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 CNTD2Q9H8S5 307 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF71Q9NQZ8 489 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms