RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OR10A5Q9H207 317 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 TREM2Q9NZC2 230 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 K7EPK0 472 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 NUDT14O95848 222 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 SELLP14151 372 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 SPEM2Q0P670 501 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 CCINQ13939 588 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 C2orf27AQ580R0 203 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 PRR22Q8IZ63 422 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 FAM71E2Q8N5Q1 922 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 DTWD2Q8NBA8 298 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 OR10H5Q8NGA6 315 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 DGAT2Q96PD7 388 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 RTBDNQ9BSG5 229 aaPredicted RBP14.68□□□□□ -0.06
TPM1-228ENST00000560975 G6PC2Q9NQR9 355 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 DNAJB11Q9UBS4 358 aa14.68□□□□□ -0.06
TPM1-228ENST00000560975 IGLV1-36A0A0B4J1U3 117 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 LOC390937A0A1W2PQ73 354 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 H7C1Q1 480 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 SOCS1O15524 211 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 C1QL1O75973 258 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 SLC34A2O95436 690 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 IFNA17P01571 189 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 PET100P0DJ07 73 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 SNCAP37840 140 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 TMEM33P57088 247 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 RPS21P63220 83 aaKnown RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 ACTBL2Q562R1 376 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 DCXRQ7Z4W1 244 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ANGPTL5Q86XS5 388 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ZNF440Q8IYI8 595 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 METTL27Q8N6F8 245 aaPredicted RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 MARS2Q96GW9 593 aaKnown RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 BANF2Q9H503 90 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 THAP10Q9P2Z0 257 aaPredicted RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 LSM5Q9Y4Y9 91 aaKnown RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 MMP24Q9Y5R2 645 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 IFITM10A6NMD0 228 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 SCDO00767 359 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 TAAR5O14804 337 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ZNF264O43296 627 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ZNF217O75362 1048 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 MPIG6BO95866 241 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 SCGB1D2O95969 90 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ZNF708P17019 499 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 CXCR1P25024 350 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 LYPD6Q86Y78 171 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 NKAIN3Q8N8D7 197 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ST7LQ8TDW4 575 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 FOXQ1Q9C009 403 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 TUBA4BQ9H853 241 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 PUS1Q9Y606 427 aaKnown RBP eCLIP14.67□□□□□ -0.06
TPM1-228ENST00000560975 POMT1Q9Y6A1 747 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 CD37P11049 281 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 PMELP40967 661 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 P2RY4P51582 365 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ZNF239Q16600 458 aaKnown RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 IAH1Q2TAA2 248 aaPredicted RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 PDZD11Q5EBL8 140 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 DMRTC1Q5HYR2 192 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 NSUN5P2Q63ZY6 315 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ADAT3Q96EY9 351 aaPredicted RBP14.67□□□□□ -0.06
TPM1-228ENST00000560975 PIGQQ9BRB3 760 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 ST6GALNAC5Q9BVH7 336 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 STARD10Q9Y365 291 aa14.67□□□□□ -0.06
TPM1-228ENST00000560975 A0A1W2PP11 408 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 CSF2RAP15509 400 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 S100A2P29034 98 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 RPL27P61353 136 aaKnown RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 C12orf76Q8N812 135 aaPredicted RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 BAHD1Q8TBE0 780 aaPredicted RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 BSCL2Q96G97 398 aaPredicted RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 RTN4RQ9BZR6 473 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 A0A0A6YYD4 124 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 ITGA3P26006 1051 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 GPR3P46089 330 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 SSTP61278 116 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 QRFPP83859 136 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 PLAC9Q5JTB6 97 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 FAM78AQ5JUQ0 283 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 MRPL43Q8N983 215 aaKnown RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 OR5H2Q8NGV7 314 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 ERGIC1Q969X5 290 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 S100PBPQ96BU1 408 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 JSRP1Q96MG2 331 aaPredicted RBP14.66□□□□□ -0.06
TPM1-228ENST00000560975 FAM60AQ9NP50 221 aa14.66□□□□□ -0.06
TPM1-228ENST00000560975 MUC22E2RYF6 1773 aaPredicted RBP14.65□□□□□ -0.06
TPM1-228ENST00000560975 HCRTR2O43614 444 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 RAD51DO75771 328 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 OR2C1O95371 312 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 CAMLGP49069 296 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 FMODQ06828 376 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.65□□□□□ -0.06
TPM1-228ENST00000560975 OR56B1Q8NGI3 324 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 OR13G1Q8NGZ3 307 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 UBQLN4Q9NRR5 601 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 HRASLS2Q9NWW9 162 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 CXorf65A6NEN9 183 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 PRH1P02810 166 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms