RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 DLL4Q9NR61 685 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF275Q9NSD4 429 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM100Q9NV29 134 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 UBAP1Q9NZ09 502 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 PCDHB10Q9UN67 800 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM14AQ9Y6G1 99 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 CR1P17927 2039 aa6.81□□□□□ -1.32
LRRC28-219ENST00000560483 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ANKRD30BLA7E2S9 258 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 PHYHO14832 338 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 XRCC2O43543 280 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 RPP14O95059 124 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 HLA-DPB1P04440 258 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ALPLP05186 524 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 PSKH1P11801 424 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF16P17020 682 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 KITLGP21583 273 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 GNALP38405 381 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 SRP9P49458 86 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 MMP15P51511 669 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 RIDAP52758 137 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF121P58317 390 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 CXCR4P61073 352 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 SLC3A1Q07837 685 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 RCN1Q15293 331 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM249Q2WGJ8 235 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 TEX30Q5JUR7 227 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 GLYATL3Q5SZD4 288 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 NXNL2Q5VZ03 156 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 C12orf73Q69YU5 71 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 SLC35F2Q8IXU6 374 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 TIGD4Q8IY51 512 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 YIPF7Q8N8F6 280 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 BOLLQ8N9W6 283 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 OR8G5Q8NG78 346 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 OR10S1Q8NGN2 331 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 OR8J1Q8NGP2 316 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 OR8S1Q8NH09 359 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ST7LQ8TDW4 575 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ITLN1Q8WWA0 313 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 CYGBQ8WWM9 190 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 RAB1CQ92928 201 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 YIPF5Q969M3 257 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 HAVCR1Q96D42 359 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 REEP6Q96HR9 211 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 OR2V2Q96R30 315 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 GAL3ST1Q99999 423 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ADAT1Q9BUB4 502 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 C1QTNF5Q9BXJ0 243 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 GABARAPL3Q9BY60 117 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 YIPF3Q9GZM5 350 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 LPAR2Q9HBW0 351 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 DDX28Q9NUL7 540 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 NKIRAS2Q9NYR9 191 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 TMEFF2Q9UIK5 374 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 PPP1R3CQ9UQK1 317 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 NOP16Q9Y3C1 178 aaKnown RBP6.8□□□□□ -1.32
LRRC28-219ENST00000560483 ABCA1O95477 2261 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 DYSFO75923 2080 aa6.8□□□□□ -1.32
LRRC28-219ENST00000560483 CSPG4Q6UVK1 2322 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM269A0A1B0GVZ9 245 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 hCG_1807616A0A1W2PRN6 198 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 A6NLC8 198 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 LRRC30A6NM36 301 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 INAFM1C9JVW0 142 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 F5H5P2 479 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ICMTO60725 284 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 TGFAP01135 160 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 KRT8P05787 483 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 SBK2P0C263 348 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 SLC2A5P22732 501 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CA6P23280 308 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CFL1P23528 166 aaKnown RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CRYBB2P43320 205 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 GZMKP49863 264 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM33P57088 247 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 IL5RAQ01344 420 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF92Q03936 586 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 LOXL1Q08397 574 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 MZT1Q08AG7 82 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ODF4Q2M2E3 257 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF829Q3KNS6 432 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF322Q6U7Q0 402 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 FBXW12Q6X9E4 464 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 KCTD8Q6ZWB6 473 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 FAM220AQ7Z4H9 259 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 THAP5Q7Z6K1 395 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 FTMTQ8N4E7 242 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 OR56B2PQ8NGI1 322 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 OR52H1Q8NGJ2 320 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 OR11L1Q8NGX0 322 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 RNF133Q8WVZ7 376 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 ASB17Q8WXJ9 295 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 DVL3Q92997 716 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 AMELYQ99218 206 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms