RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 RABEP2Q9H5N1 569 aa13.54□□□□□ -0.24
HERC1-207ENST00000560316 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
HERC1-207ENST00000560316 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
HERC1-207ENST00000560316 SNX13Q9Y5W8 968 aa13.54□□□□□ -0.24
HERC1-207ENST00000560316 ADARB2-AS1A8MUL3 147 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 ANOS1P23352 680 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 PAX6P26367 422 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 SDHAP31040 664 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 IFNA8P32881 189 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 GGT2P36268 569 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
HERC1-207ENST00000560316 UBE2E1P51965 193 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 ZNF92Q03936 586 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
HERC1-207ENST00000560316 TRAM2Q15035 370 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 PCK2Q16822 640 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 DEFB121Q5J5C9 76 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 CRIP3Q6Q6R5 217 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 ZNF730Q6ZMV8 503 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 SEH1LQ96EE3 360 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 OR4F4Q96R69 305 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 DCTN5Q9BTE1 182 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 FNDC11Q9BVV2 318 aa13.53□□□□□ -0.24
HERC1-207ENST00000560316 RANBP3Q9H6Z4 567 aaPredicted RBP13.53□□□□□ -0.24
HERC1-207ENST00000560316 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
HERC1-207ENST00000560316 A0A087WUU8 490 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 MEGF11A6BM72 1044 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 GGT3PA6NGU5 568 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 FFAR1O14842 300 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 CHST1O43916 411 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 IFNA14P01570 189 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 SELLP14151 372 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
HERC1-207ENST00000560316 HABP2Q14520 560 aaPredicted RBP13.52□□□□□ -0.25
HERC1-207ENST00000560316 MICBQ29980 383 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 SNAI3Q3KNW1 292 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 SLC18B1Q6NT16 456 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 CROCCP2Q86T23 111 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 LNX2Q8N448 690 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 OR51G2Q8NGK0 314 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 LRRC29Q8WV35 223 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 H1FXQ92522 213 aaKnown RBP13.52□□□□□ -0.25
HERC1-207ENST00000560316 ATF6BQ99941 703 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.25
HERC1-207ENST00000560316 IER3IP1Q9Y5U9 82 aa13.52□□□□□ -0.25
HERC1-207ENST00000560316 ACOT8O14734 319 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 NDUFB3O43676 98 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 PPP1R3DO95685 299 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 MUC1P15941 1255 aaPredicted RBP13.51□□□□□ -0.25
HERC1-207ENST00000560316 CD33P20138 364 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 ACSM1Q08AH1 577 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 ECH1Q13011 328 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 GPR139Q6DWJ6 353 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 PGM2L1Q6PCE3 622 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 TMPRSS11FQ6ZWK6 438 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 MBOAT2Q6ZWT7 520 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 SLC36A1Q7Z2H8 476 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 C11orf53Q8IXP5 236 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
HERC1-207ENST00000560316 SLC7A13Q8TCU3 470 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 AJUBAQ96IF1 538 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 DMRTB1Q96MA1 342 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 NKX3-1Q99801 234 aaPredicted RBP13.51□□□□□ -0.25
HERC1-207ENST00000560316 PARD6BQ9BYG5 372 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 NPFFR1Q9GZQ6 430 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 FAM234AQ9H0X4 552 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 PNRC2Q9NPJ4 139 aaKnown RBP13.51□□□□□ -0.25
HERC1-207ENST00000560316 NRIP3Q9NQ35 241 aa13.51□□□□□ -0.25
HERC1-207ENST00000560316 MRPL15Q9P015 296 aaKnown RBP13.51□□□□□ -0.25
HERC1-207ENST00000560316 IGLV1-36A0A0B4J1U3 117 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.5□□□□□ -0.25
HERC1-207ENST00000560316 NDUFB2O95178 105 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 AMY2BP19961 511 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 KDELR2P33947 212 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 CYLC2Q14093 348 aaPredicted RBP13.5□□□□□ -0.25
HERC1-207ENST00000560316 LRRC75BQ2VPJ9 315 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 GLYATL3Q5SZD4 288 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 TSEN54Q7Z6J9 526 aaKnown RBP13.5□□□□□ -0.25
HERC1-207ENST00000560316 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 ADCK1Q86TW2 530 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 OR5T2Q8NGG2 359 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 C8orf46Q8TAG6 207 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 FAM46AQ96IP4 442 aaKnown RBP13.5□□□□□ -0.25
HERC1-207ENST00000560316 SRA1Q9HD15 236 aaKnown RBP13.5□□□□□ -0.25
HERC1-207ENST00000560316 RAB18Q9NP72 206 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 SERTAD4Q9NUC0 356 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 B9D1Q9UPM9 204 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 SIGLEC7Q9Y286 467 aa13.5□□□□□ -0.25
HERC1-207ENST00000560316 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.49□□□□□ -0.25
HERC1-207ENST00000560316 M0R135 149 aa13.49□□□□□ -0.25
HERC1-207ENST00000560316 BHLHE40O14503 412 aa13.49□□□□□ -0.25
HERC1-207ENST00000560316 PTP4A3O75365 173 aa13.49□□□□□ -0.25
HERC1-207ENST00000560316 TFF1P04155 84 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms