RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 COA3Q9Y2R0 106 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF737O75373 536 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PRSS56P0CW18 603 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 TBXA2RP21731 343 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 CLDN20P56880 219 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR4A47Q6IF82 309 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR2G2Q8NGZ5 317 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PTHLHP12272 177 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PRTGQ2VWP7 1150 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM25Q86YD3 366 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 GALNT16Q8N428 558 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 MANBALQ9NQG1 85 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 H0YGG7 62 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 HIST1H1BP16401 226 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 CD82P27701 267 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 CLDN2P57739 230 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 CTU2Q2VPK5 515 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 USP22Q9UPT9 525 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SERPINE3A8MV23 424 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZBTB25P24278 435 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 ACP1P24666 158 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR10J1P30954 320 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PLP1P60201 277 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 TRMT61AQ96FX7 289 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 IL17BQ9UHF5 180 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PRRG2O14669 202 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 SPINK4O60575 86 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 NID1P14543 1247 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 JAG1P78504 1218 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 LKAAEAR1Q8TD35 194 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 PPLO60437 1756 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 FITM1A5D6W6 292 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 UBE2L6O14933 153 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 HCRTR1O43613 425 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 AOAHP28039 575 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 C1orf140Q5VVS0 124 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CLDN23Q96B33 292 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 TOE1Q96GM8 510 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 DHRS7CA6NNS2 312 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CSF2RBP32927 897 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 NAA50Q9GZZ1 169 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 SOX21Q9Y651 276 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 PIPP12273 146 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CLDN18P56856 261 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 GGTA1PQ4G0N0 100 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 LINC00696Q6ZRV3 163 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 YRDCQ86U90 279 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 RTN4IP1Q8WWV3 396 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 FAM210BQ96KR6 192 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 SORT1Q99523 831 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CLDN34H7C241 214 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CORTO00230 105 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF25P17030 456 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 EXD3Q8N9H8 876 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 DUXBA0A1W2PPF3 345 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR2A25A4D2G3 310 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 TNFRSF10CO14798 259 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 CD38P28907 300 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 PNLIPRP3Q17RR3 467 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 FAHD2AQ96GK7 314 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 TCFL5Q9UL49 500 aa12.6□□□□□ -0.39
CSPG4P12-202ENST00000559989 GABRB1P18505 474 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 HIST3H3Q16695 136 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PFN4Q8NHR9 129 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PCYT2Q99447 389 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 OCIAD1Q9NX40 245 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 AMMECR1Q9Y4X0 333 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMPRSS11DO60235 418 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 RNF224P0DH78 156 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 LINC00299Q6ZSB3 139 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 A0A1B0GWA3 101 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 CYBAP13498 195 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PVRP15151 417 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 GP2P55259 537 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PKIAP61925 76 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 LPAL2Q16609 132 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 ICAM5Q9UMF0 924 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 RELBQ01201 579 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms