RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FAM71F1Q96KD3 344 aaPredicted RBP10.54□□□□□ -0.72
HERC1-205ENST00000559886 CDH20Q9HBT6 801 aa10.54□□□□□ -0.72
HERC1-205ENST00000559886 HCFC1P51610 2035 aa10.54□□□□□ -0.72
HERC1-205ENST00000559886 LOC390937A0A1W2PQ73 354 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 J3QW42 95 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 LMX1BO60663 402 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 ZNF35P13682 527 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 MYL9P24844 172 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 CDSNQ15517 529 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 TPRA1Q86W33 373 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 PARP16Q8N5Y8 322 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 OR14K1Q8NGZ2 314 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 RNASE6Q93091 150 aaKnown RBP10.53□□□□□ -0.72
HERC1-205ENST00000559886 NPAP1Q9NZP6 1156 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 STARD10Q9Y365 291 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 V9GYS6 101 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 CASKO14936 926 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 DHRS3O75911 302 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 CLEC2LP0C7M8 214 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 PPP3CBP16298 524 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 ZNF92Q03936 586 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 MXD1Q05195 221 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 ASPHD2Q6ICH7 369 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 AKAP1Q92667 903 aaKnown RBP eCLIP10.53□□□□□ -0.72
HERC1-205ENST00000559886 SLC25A46Q96AG3 418 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 FGGYQ96C11 551 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 TPK1Q9H3S4 243 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 SNTG1Q9NSN8 517 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 CADP27708 2225 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 ADGRG4Q8IZF6 3080 aa10.53□□□□□ -0.72
HERC1-205ENST00000559886 TRAV8-7A0A075B6U6 113 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 NKX2-6A6NCS4 301 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 ANKRD61A6NGH8 418 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 DHRS7CA6NNS2 312 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 MTRF1O75570 445 aaKnown RBP10.52□□□□□ -0.72
HERC1-205ENST00000559886 CFL1P23528 166 aaKnown RBP10.52□□□□□ -0.72
HERC1-205ENST00000559886 ZNF83P51522 516 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 RFPL4BQ6ZWI9 263 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.72
HERC1-205ENST00000559886 DACH2Q96NX9 599 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 KCNJ16Q9NPI9 418 aa10.52□□□□□ -0.72
HERC1-205ENST00000559886 EIF3KQ9UBQ5 218 aaKnown RBP10.52□□□□□ -0.72
HERC1-205ENST00000559886 IGHV2OR16-5A0A0B4J2B6 119 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 FSTP19883 344 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 AGAP20933 346 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 FAM3AP98173 230 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 MALLQ13021 153 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 SERPINA12Q8IW75 414 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 OR5L1Q8NGL2 311 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 LRRC46Q96FV0 321 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
HERC1-205ENST00000559886 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
HERC1-205ENST00000559886 TCF7L1Q9HCS4 588 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 CCDC59Q9P031 241 aaKnown RBP10.52□□□□□ -0.73
HERC1-205ENST00000559886 FOXJ3Q9UPW0 622 aa10.52□□□□□ -0.73
HERC1-205ENST00000559886 SPTBN1Q01082 2364 aaKnown RBP10.52□□□□□ -0.73
HERC1-205ENST00000559886 hCG_38984A0A1B0GV85 526 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 M0R1B8 84 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 SMPD2O60906 423 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 THBDP07204 575 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 IGFBP3P17936 291 aaPredicted RBP10.51□□□□□ -0.73
HERC1-205ENST00000559886 UCP2P55851 309 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 NAAAQ02083 359 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 GK2Q14410 553 aaPredicted RBP10.51□□□□□ -0.73
HERC1-205ENST00000559886 OR8B8Q15620 311 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 DGUOKQ16854 277 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 CEP78Q5JTW2 689 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 NR2C2APQ86WQ0 139 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 C10orf35Q96D05 121 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 BARHL1Q9BZE3 327 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 SLITRK2Q9H156 845 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 A6NIN4 97 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 ZG16O60844 167 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 EPXP11678 715 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 RAB3BP20337 219 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 ACKR3P25106 362 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 MAP2K3P46734 347 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 GSK3AP49840 483 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 RORCP51449 518 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 TNK1Q13470 666 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 XKRXQ6PP77 449 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 LRRTM1Q86UE6 522 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 ITLN2Q8WWU7 325 aaPredicted RBP10.51□□□□□ -0.73
HERC1-205ENST00000559886 ITFG2Q969R8 447 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 WFIKKN1Q96NZ8 548 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 POFUT1Q9H488 388 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 OPA3Q9H6K4 179 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 TAS2R4Q9NYW5 299 aa10.51□□□□□ -0.73
HERC1-205ENST00000559886 SMIM30A4D0T7 59 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 NCR1O76036 304 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 FAM157BP0CG42 384 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 ZNF20P17024 532 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 ADRA2CP18825 462 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 CALCRP30988 508 aa10.5□□□□□ -0.73
HERC1-205ENST00000559886 SOX6P35712 828 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms