RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 PGAP1Q75T13 922 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 COMMD2Q86X83 199 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 ROBO4Q8WZ75 1007 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 ATG5Q9H1Y0 275 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 EXO5Q9H790 373 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 HRASLSQ9HDD0 168 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 A0A0A6YYH2 397 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 A6NJ64 397 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 WISP2O76076 250 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 GABRA1P14867 456 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 RAB25P57735 213 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 ZFP69Q49AA0 526 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 ELFN2Q5R3F8 820 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 OLFML2AQ68BL7 652 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 BTN2A1Q7KYR7 527 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 ABHD12BQ7Z5M8 362 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 LYPD6Q86Y78 171 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 GPR137CQ8N3F9 429 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 CPT1CQ8TCG5 803 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 AKAP1Q92667 903 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNX1-208ENST00000559844 GCDHQ92947 438 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 ADAT3Q96EY9 351 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 BBC3Q96PG8 261 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 UQCC2Q9BRT2 126 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 NEK6Q9HC98 313 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 NUDT15Q9NV35 164 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 ASF1BQ9NVP2 202 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 TAS2R8Q9NYW2 309 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 GTF3C1Q12789 2109 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 ZGRF1Q86YA3 2104 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 CIB4A0PJX0 185 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 RBBP9O75884 186 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 RAB6AP20340 208 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 CLDN15P56746 228 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 RRAS2P62070 204 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 ZNF529Q6P280 563 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 FAM57BQ71RH2 274 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 SLC22A24Q8N4F4 322 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 METTL17Q9H7H0 456 aaPredicted RBP15.6■□□□□ 0.09
SNX1-208ENST00000559844 KLK11Q9UBX7 282 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 N6AMT1Q9Y5N5 214 aa15.6■□□□□ 0.09
SNX1-208ENST00000559844 KALRNO60229 2985 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 TRGV5A0A0B4J1U4 118 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 LDLRAD4O15165 306 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 GALK2Q01415 458 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 SSBP1Q04837 148 aaKnown RBP15.59■□□□□ 0.09
SNX1-208ENST00000559844 KCNJ8Q15842 424 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 CCDC92Q53HC0 331 aaPredicted RBP15.59■□□□□ 0.09
SNX1-208ENST00000559844 ZNF324BQ6AW86 544 aaPredicted RBP15.59■□□□□ 0.09
SNX1-208ENST00000559844 CDH26Q8IXH8 852 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 LRRC18Q8N456 261 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 CCDC54Q8NEL0 328 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 TMEM45BQ96B21 275 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 PGAM5Q96HS1 289 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 GPR84Q9NQS5 396 aa15.59■□□□□ 0.09
SNX1-208ENST00000559844 TRAV6A0A075B6T7 132 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 TRAV18A0A075B6X5 111 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 C7orf66A4D0T2 115 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 H7C417 338 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 IGHG3P01860 377 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 CST2P09228 141 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 H2AFB2P0C5Z0 115 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 SLC2A1P11166 492 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 FAUP35544 74 aaKnown RBP15.58■□□□□ 0.09
SNX1-208ENST00000559844 RIPPLY2Q5TAB7 128 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 OR56B4Q8NH76 319 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 SPTSSAQ969W0 71 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 ING3Q9NXR8 418 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 MTFP1Q9UDX5 166 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 PAIP2BQ9ULR5 123 aaKnown RBP15.58■□□□□ 0.09
SNX1-208ENST00000559844 SLC5A6Q9Y289 635 aa15.58■□□□□ 0.09
SNX1-208ENST00000559844 SHANK1Q9Y566 2161 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 SULT1C2O00338 296 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 CSF1P09603 554 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 PRSS3P35030 304 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 LHX2P50458 406 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 CCR6P51684 374 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 TCTE3Q8IZS6 198 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 MEIOBQ8N635 442 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 ZNF775Q96BV0 537 aaPredicted RBP15.58■□□□□ 0.08
SNX1-208ENST00000559844 GPR137Q96N19 417 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 KCNK15Q9H427 330 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 PAQR5Q9NXK6 330 aaPredicted RBP15.58■□□□□ 0.08
SNX1-208ENST00000559844 PLEK2Q9NYT0 353 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 MRPL15Q9P015 296 aaKnown RBP15.58■□□□□ 0.08
SNX1-208ENST00000559844 RAB22AQ9UL26 194 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 RHBDD3Q9Y3P4 386 aa15.58■□□□□ 0.08
SNX1-208ENST00000559844 A0A0U1RQV5 110 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 A8MV72 311 aaPredicted RBP15.57■□□□□ 0.08
SNX1-208ENST00000559844 BPNT1O95861 308 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 SCRN3Q0VDG4 424 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 RAB35Q15286 201 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 OR4D6Q8NGJ1 314 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 OR13C9Q8NGT0 318 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 SLX1AQ9BQ83 275 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 CNTD2Q9H8S5 307 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 RANGRFQ9HD47 186 aaPredicted RBP15.57■□□□□ 0.08
SNX1-208ENST00000559844 TMEM38BQ9NVV0 291 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 ZNF319Q9P2F9 582 aa15.57■□□□□ 0.08
SNX1-208ENST00000559844 IGKV3D-15A0A087WSY6 115 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms