RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 IFI30P13284 250 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 CTLA4P16410 223 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 MSR1P21757 451 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 ANOS1P23352 680 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 FPR2P25090 351 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 DCKP27707 260 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 KDELR2P33947 212 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 YAP1P46937 504 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 FXYD6P3P58550 94 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 BTG1P62324 171 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 SELENOWP63302 87 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 PRKCDQ05655 676 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 SLC3A1Q07837 685 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 SRSF4Q08170 494 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 FOXL1Q12952 345 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 HLXQ14774 488 aaPredicted RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 PDLIM3Q53GG5 364 aaPredicted RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 CCDC92Q53HC0 331 aaPredicted RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 OR2T5Q6IEZ7 315 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 HDDC2Q7Z4H3 204 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 VTCN1Q7Z7D3 282 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 NRMQ8IXM6 262 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 C1orf174Q8IYL3 243 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 OR2Z1Q8NG97 314 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 OR2T29Q8NH02 315 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 RAB2BQ8WUD1 216 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 GATAD2BQ8WXI9 593 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 UPRTQ96BW1 309 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 HAVCR1Q96D42 359 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 CMBLQ96DG6 245 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 PRRC1Q96M27 445 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 Q96M85 177 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 RBP7Q96R05 134 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 APOL4Q9BPW4 351 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 KCNN2Q9H2S1 579 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 PRDM13Q9H4Q3 707 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 UNKLQ9H9P5 680 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 TMEM165Q9HC07 324 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 DDX28Q9NUL7 540 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 RHCGQ9UBD6 479 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 EIF3KQ9UBQ5 218 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 IGHV3-64DA0A0J9YX35 117 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 LOC100130705A0A1B0GUX0 176 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 HTR3EA5X5Y0 456 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ARRDC5A6NEK1 342 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 A6NIZ1 184 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 DCTN6O00399 190 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TIMM8AO60220 97 aaPredicted RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 DOK2O60496 412 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 PTP4A3O75365 173 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 FCN3O75636 299 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ZNF205O95201 554 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ABHD16AO95870 558 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 GPANK1O95872 356 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 SERPINA1P01009 418 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 SEMG1P04279 462 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 FABP3P05413 133 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 GNAO1P09471 354 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PPIAL4GP0DN37 164 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 SELEP16581 610 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 MDKP21741 143 aaPredicted RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 CRHBPP24387 322 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 MDH2P40926 338 aaKnown RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 GPR4P46093 362 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 KRTAP10-3P60369 221 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 RAP1BP61224 184 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ISL1P61371 349 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PCBD1P61457 104 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 RAP1AP62834 184 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 HIST1H3AP68431 136 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 DEFA6Q01524 100 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ST3GAL3Q11203 375 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 BAMBIQ13145 260 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 DCTN2Q13561 401 aaKnown RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 KRTAP27-1Q3LI81 207 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ARMCX4Q5H9R4 360 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 C6orf141Q5SZD1 244 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 HIST2H3PS2Q5TEC6 136 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ZNF691Q5VV52 312 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 FAM205BPQ63HN1 556 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 KDM4DQ6B0I6 523 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 LEG1Q6P5S2 330 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 FBXW12Q6X9E4 464 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ZNF841Q6ZN19 808 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PTCHD4Q6ZW05 846 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TMPRSS11FQ6ZWK6 438 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 HIST2H3AQ71DI3 136 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ZDHHC21Q8IVQ6 265 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PARP8Q8N3A8 854 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 KLHL36Q8N4N3 616 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 SPICQ8N5J4 248 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 NPEPL1Q8NDH3 523 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 OR10AD1Q8NGE0 317 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms