RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, human

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BMP4-208	ENST00000559642	SPSB4	Q96A44	273 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	CENPN	Q96H22	339 aa	Predicted RBP	10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	REEP6	Q96HR9	211 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	PKP2	Q99959	881 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	RIBC2	Q9H4K1	309 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	UFSP2	Q9NUQ7	469 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	ZNF319	Q9P2F9	582 aa		10.85	□□□□□ -0.67
BMP4-208	ENST00000559642	TRAV20	A0A0B4J274	112 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	PRR32	B1ATL7	298 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642		H3BNX3	289 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	PSMD9	O00233	223 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	FAM20B	O75063	409 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	IFNA2	P01563	188 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	POLR2I	P36954	125 aa	Known RBP	10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SRP14	P37108	136 aa	Known RBP	10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	CD200	P41217	278 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	RAD23A	P54725	363 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SEC61A1	P61619	476 aa	Known RBP	10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	LCN2	P80188	198 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	FAM3A	P98173	230 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SRSF2	Q01130	221 aa	Known RBP	10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	MPPED2	Q15777	294 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SLC16A9	Q7RTY1	509 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SPIC	Q8N5J4	248 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	SGK3	Q96BR1	496 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	PGAM5	Q96HS1	289 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	IL4I1	Q96RQ9	567 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	TEAD3	Q99594	435 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	PRRG3	Q9BZD7	231 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	OPA3	Q9H6K4	179 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	G6PC2	Q9NQR9	355 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	LAMP5	Q9UJQ1	280 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	PCDHB10	Q9UN67	800 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	COPS3	Q9UNS2	423 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	LRP12	Q9Y561	859 aa		10.84	□□□□□ -0.67
BMP4-208	ENST00000559642	ARHGAP32	A7KAX9	2087 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	hCG_38984	A0A1B0GV85	526 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	EBAG9	O00559	213 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	PNP	P00491	289 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	ANPEP	P15144	967 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	ALOX5AP	P20292	161 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	PCMT1	P22061	227 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	MDH2	P40926	338 aa	Known RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	GATA4	P43694	442 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	PSMA6	P60900	246 aa	Known RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	TMEM155	Q4W5P6	130 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	LRRC28	Q86X40	367 aa	Predicted RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	KLHL36	Q8N4N3	616 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	C19orf18	Q8NEA5	215 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	OR8B12	Q8NGG6	310 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	OR52H1	Q8NGJ2	320 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	TMEM163	Q8TC26	289 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	FAHD2A	Q96GK7	314 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	CNN2	Q99439	309 aa	Known RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	OSBPL10	Q9BXB5	764 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	GABARAPL3	Q9BY60	117 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	YIPF3	Q9GZM5	350 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	OR10A2	Q9H208	303 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	PPP1R3E	Q9H7J1	279 aa		10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	MRPL15	Q9P015	296 aa	Known RBP	10.83	□□□□□ -0.68
BMP4-208	ENST00000559642	CEACAM18	A8MTB9	384 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642		F5H0A9	414 aa	Predicted RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	IFNL4	K9M1U5	179 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	PHF1	O43189	567 aa	Predicted RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	AVP	P01185	164 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	APOC1	P02654	83 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	ZFP36	P26651	326 aa	Known RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	GSK3A	P49840	483 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	EFNB1	P98172	346 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	ZNF181	Q2M3W8	571 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	AADACL4	Q5VUY2	407 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	RHOU	Q7L0Q8	258 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	MEPCE	Q7L2J0	689 aa	Known RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	KRT77	Q7Z794	578 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	CELF2-AS1	Q8N7Q2	184 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642		Q8TCH9	128 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	LYZL4	Q96KX0	146 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	SLC22A4	Q9H015	551 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	SP140L	Q9H930	580 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	PATZ1	Q9HBE1	687 aa	Known RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	ADGRL4	Q9HBW9	690 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	ENOPH1	Q9UHY7	261 aa		10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	NOP16	Q9Y3C1	178 aa	Known RBP	10.82	□□□□□ -0.68
BMP4-208	ENST00000559642	LOC105371242	A0A075B767	164 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642		A0A0G2JMP0	313 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642		A0A0X1KG70	313 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642		A6NLC8	198 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	LRRC30	A6NM36	301 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	ANKRD30BL	A7E2S9	258 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	EI24	O14681	340 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	GMDS	O60547	372 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	GRP	P07492	148 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	IRF2	P14316	349 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	RPS2	P15880	293 aa	Known RBP	10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	CD80	P33681	288 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	DCAF12L2	Q5VW00	463 aa		10.81	□□□□□ -0.68
BMP4-208	ENST00000559642	NXNL2	Q5VZ03	156 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms