RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 FZR1Q9UM11 496 aa8.27□□□□□ -1.09
CUX1-216ENST00000558469 DCHS2Q6V1P9 2916 aa8.27□□□□□ -1.09
CUX1-216ENST00000558469 RAI1Q7Z5J4 1906 aaPredicted RBP8.27□□□□□ -1.09
CUX1-216ENST00000558469 ABCA4P78363 2273 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 LOC107986453A0A1B0GWG9 222 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 TMEM212A6NML5 194 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 E7EQL1 145 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 ISG15P05161 165 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 UBCP0CG48 685 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 JUNBP17275 347 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 TUBG1P23258 451 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 GCH1P30793 250 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 GLRXP35754 106 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 MPV17P39210 176 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 FABP6P51161 128 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 GP2P55259 537 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 RPS23P62266 143 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 TPBGQ13641 420 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 GK2Q14410 553 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 ZNF718Q3SXZ3 478 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 SYT6Q5T7P8 510 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 TMEM244Q5VVB8 128 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 MRPL21Q7Z2W9 205 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 LILRB1Q8NHL6 650 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 RPS4Y2Q8TD47 263 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 KLF14Q8TD94 323 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 TMEM171Q8WVE6 324 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 CMBLQ96DG6 245 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 MARS2Q96GW9 593 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 FAM71F1Q96KD3 344 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 TMEM204Q9BSN7 226 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 SOX7Q9BT81 388 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 TMED9Q9BVK6 235 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 RGCCQ9H4X1 137 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 TUBG2Q9NRH3 451 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 CA10Q9NS85 328 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 CISD1Q9NZ45 108 aaKnown RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 PLEKHB1Q9UF11 243 aaPredicted RBP8.26□□□□□ -1.09
CUX1-216ENST00000558469 ZNF391Q9UJN7 358 aa8.26□□□□□ -1.09
CUX1-216ENST00000558469 DSCAMO60469 2012 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 ROS1P08922 2347 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 A0A1B0GTI1 187 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 A0A1B0GVI7 797 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 CCRL2O00421 344 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 SYT7O43581 403 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 GOSR1O95249 250 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 IGLV3-1P01715 115 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 TFAP2AP05549 437 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 CD1AP06126 327 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 RAC2P15153 192 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 ZNF250P15622 560 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 CFL1P23528 166 aaKnown RBP8.25□□□□□ -1.09
CUX1-216ENST00000558469 LIPAP38571 399 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 GSK3AP49840 483 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 FAM3AP98173 230 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 GPR50Q13585 617 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 SSX1Q16384 188 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 MSMPQ1L6U9 139 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 ZNF672Q499Z4 452 aaPredicted RBP8.25□□□□□ -1.09
CUX1-216ENST00000558469 MBNL2Q5VZF2 373 aaKnown RBP8.25□□□□□ -1.09
CUX1-216ENST00000558469 FBXW12Q6X9E4 464 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 PGAP1Q75T13 922 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 LRP11Q86VZ4 500 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 PHC2Q8IXK0 858 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 OR51A4Q8NGJ6 313 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 OR13C5Q8NGS8 318 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 OR10AC1Q8NH08 325 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 SYNPRQ8TBG9 265 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 RGP1Q92546 391 aaPredicted RBP8.25□□□□□ -1.09
CUX1-216ENST00000558469 SPSB4Q96A44 273 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 PGLYRP3Q96LB9 341 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 DUSP13Q9UII6 198 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 HHLA2Q9UM44 414 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 ZNF281Q9Y2X9 895 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 CMAHPQ9Y471 501 aa8.25□□□□□ -1.09
CUX1-216ENST00000558469 CHD3Q12873 2000 aaKnown RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 FASNP49327 2511 aaKnown RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 hCG_38984A0A1B0GV85 526 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 FAM221AA4D161 298 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 GGT3PA6NGU5 568 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 A6NIN4 97 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 VSTM5A8MXK1 200 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 LMX1BO60663 402 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 MTRF1O75570 445 aaKnown RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 OR4A8P0C604 315 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 ACHEP22303 614 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 CCL1P22362 96 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 APOBEC3AP31941 199 aaPredicted RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 MAGEB1P43366 347 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 MAP2K3P46734 347 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 KLF3P57682 345 aaPredicted RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 RPS25P62851 125 aaKnown RBP8.24□□□□□ -1.09
CUX1-216ENST00000558469 PSG7Q13046 419 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 ADIPOQQ15848 244 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 YIF1BQ5BJH7 314 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 OR2T2Q6IF00 324 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 DOK3Q7L591 496 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 OR5AS1Q8N127 324 aa8.24□□□□□ -1.09
CUX1-216ENST00000558469 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms