RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PLEKHA8Q96JA3 519 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 TEX12Q9BXU0 123 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 WDR76Q9H967 626 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 ZNF556Q9HAH1 456 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 NTN4Q9HB63 628 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 VNN3Q9NY84 501 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 LOC105371242A0A075B767 164 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 GGT3PA6NGU5 568 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 TVP23AA6NH52 213 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 F5H5P2 479 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 H0YL77 283 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 H3BN98 237 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 TRIM77I1YAP6 450 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 NDUFA2O43678 99 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 GLCEO94923 617 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 FSHBP01225 129 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 RPLP1P05386 114 aaKnown RBP8.48□□□□□ -1.05
USP3-207ENST00000558218 SPARCP09486 303 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OSMP13725 252 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 ZNF12P17014 697 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 ZFP36P26651 326 aaKnown RBP8.48□□□□□ -1.05
USP3-207ENST00000558218 GSTT1P30711 240 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 RASSF2P50749 326 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 HILS1P60008 231 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 LCN2P80188 198 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 CDK5Q00535 292 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 ZNF154Q13106 437 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 KCNJ8Q15842 424 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 LRRN1Q6UXK5 716 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OR10AD1Q8NGE0 317 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OR52H1Q8NGJ2 320 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OR51L1Q8NGJ5 315 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OR9Q1Q8NGQ5 310 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 FAM216AQ8WUB2 273 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 RNF133Q8WVZ7 376 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 CCDC124Q96CT7 223 aaKnown RBP8.48□□□□□ -1.05
USP3-207ENST00000558218 CLPTM1LQ96KA5 538 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 INTS14Q96SY0 518 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 NIPSNAP1Q9BPW8 284 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 COPS4Q9BT78 406 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 SUCNR1Q9BXA5 334 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 CENPMQ9NSP4 180 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 ARMC1Q9NVT9 282 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 DCAF16Q9NXF7 216 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 PDP1Q9P0J1 537 aaPredicted RBP8.48□□□□□ -1.05
USP3-207ENST00000558218 DNAJB9Q9UBS3 223 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 INSIG2Q9Y5U4 225 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 ARHGAP32A7KAX9 2087 aa8.48□□□□□ -1.05
USP3-207ENST00000558218 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 TCRBV3S1A0A5B6 114 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 CEACAM18A8MTB9 384 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 TRAPPC2LH3BP13 241 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 PRODHO43272 600 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 E2F6O75461 281 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 SOX14O95416 240 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 HLA-DPB1P04440 258 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 PMELP40967 661 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 NPY4RP50391 375 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 ZNF92Q03936 586 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 PAX8Q06710 450 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 FLOT2Q14254 428 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 GINS1Q14691 196 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 OR8G1Q15617 311 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 SNAI3Q3KNW1 292 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 ZNF404Q494X3 552 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 SLC35D3Q5M8T2 416 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 DCDC5Q6ZRR9 648 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 MOGAT3Q86VF5 341 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 BHLHE23Q8NDY6 225 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 DEFB108BQ8NET1 73 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 SEMA6DQ8NFY4 1073 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 OR6K6Q8NGW6 343 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 RAB40AQ8WXH6 277 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 SLC7A6OSQ96CW6 309 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 NEIL1Q96FI4 390 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 MRI1Q9BV20 369 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 ABHD6Q9BV23 337 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 SSBP3Q9BWW4 388 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 MMADHCQ9H3L0 296 aaPredicted RBP8.47□□□□□ -1.05
USP3-207ENST00000558218 NIPAL2Q9H841 368 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 FN3KRPQ9HA64 309 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 MMP26Q9NRE1 261 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 C14orf119Q9NWQ9 140 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 OR5V1Q9UGF6 321 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 ZNF391Q9UJN7 358 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 POMPQ9Y244 141 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 AUP1Q9Y679 476 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
USP3-207ENST00000558218 KIR2DS1A0A191URI9 304 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 ANKRD30BLA7E2S9 258 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 PRR23D1E9PI22 279 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 GSC2O15499 205 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 FKBP6O75344 327 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 TIPRLO75663 272 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms