RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PRSS50Q9UI38 385 aa6.43□□□□□ -1.38
SPG11-204ENST00000557866 FOXJ3Q9UPW0 622 aa6.43□□□□□ -1.38
SPG11-204ENST00000557866 CACNA1CQ13936 2221 aa6.43□□□□□ -1.38
SPG11-204ENST00000557866 BSNQ9UPA5 3926 aa6.43□□□□□ -1.38
SPG11-204ENST00000557866 SPTBN2O15020 2390 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 A0A1B0GVI7 797 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 OR6C65A6NJZ3 312 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 ANXA2P2A6NMY6 339 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 K7ENP7 123 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 M0R135 149 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 PLA2G10O15496 165 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SGCEO43556 437 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 LANCL1O43813 399 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SS18L1O75177 396 aaPredicted RBP6.42□□□□□ -1.38
SPG11-204ENST00000557866 TMEM127O75204 238 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 KRT33AO76009 404 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 IL18BPO95998 194 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 ANXA2P07355 339 aaKnown RBP6.42□□□□□ -1.38
SPG11-204ENST00000557866 ITGA5P08648 1049 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 CALCBP10092 127 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SDHBP21912 280 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 PTBP1P26599 531 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPG11-204ENST00000557866 DDOSTP39656 456 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 PSMD7P51665 324 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SPOCK1Q08629 439 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SCRN3Q0VDG4 424 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 GUSBP1Q15486 140 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 TAB1Q15750 504 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 TBR1Q16650 682 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SNAI3Q3KNW1 292 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 NRN1LQ496H8 165 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 INO80CQ6PI98 192 aaPredicted RBP6.42□□□□□ -1.38
SPG11-204ENST00000557866 Q6ZSR3 168 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 SLC16A14Q7RTX9 510 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 RNF144BQ7Z419 303 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 BIVMQ86UB2 503 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 MCEMP1Q8IX19 187 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 POC5Q8NA72 575 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 C9orf106Q8NAJ2 232 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 OR5M9Q8NGP3 310 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 ZNF671Q8TAW3 534 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 THRSPQ92748 146 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 APH1AQ96BI3 265 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 ZNF799Q96GE5 643 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 PGAM5Q96HS1 289 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 FAM71F1Q96KD3 344 aaPredicted RBP6.42□□□□□ -1.38
SPG11-204ENST00000557866 CMTM3Q96MX0 182 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 HDHD2Q9H0R4 259 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 KCNK15Q9H427 330 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 NOX3Q9HBY0 568 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 B3GNT2Q9NY97 397 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 CGGBP1Q9UFW8 167 aaPredicted RBP6.42□□□□□ -1.38
SPG11-204ENST00000557866 STEAP1Q9UHE8 339 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 TIMM10BQ9Y5J6 103 aa6.42□□□□□ -1.38
SPG11-204ENST00000557866 ZNF407Q9C0G0 2248 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 IGKV1-9A0A0C4DH69 117 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 A0A0U1RQV5 110 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 LOC390937A0A1W2PQ73 354 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 ZNF587BE7ETH6 402 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SLC17A2O00624 439 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 LDLRAD4O15165 306 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 HLA-HP01893 362 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 HLA-DQB1P01920 261 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 CD2P06729 351 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 OCMP0CE72 109 aaPredicted RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 TMIGD3P0DMS9 266 aaPredicted RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 ABOP16442 354 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 OR3A2P47893 321 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 RFX2P48378 723 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 PITPNBP48739 271 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 EFNB2P52799 333 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 FAPQ12884 760 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 ECH1Q13011 328 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 IL18Q14116 193 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 RAB11BQ15907 218 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 TRIM16LQ309B1 348 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 ACSF3Q4G176 576 aaPredicted RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 PABPC1L2AQ5JQF8 200 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 UBE2NLQ5JXB2 153 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 RPUSD3Q6P087 351 aaKnown RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 DRAM2Q6UX65 266 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 DOK3Q7L591 496 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 ABHD12BQ7Z5M8 362 aaPredicted RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 LUZP2Q86TE4 346 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SERPINA12Q8IW75 414 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 ZNF100Q8IYN0 542 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 OR5AS1Q8N127 324 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 MINDY2Q8NBR6 621 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 OR51D1Q8NGF3 324 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 OR52N4Q8NGI2 321 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SYNPRQ8TBG9 265 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SPTSSAQ969W0 71 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SGK3Q96BR1 496 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 SARAFQ96BY9 339 aa6.41□□□□□ -1.38
SPG11-204ENST00000557866 GMPPAQ96IJ6 420 aaPredicted RBP6.41□□□□□ -1.38
SPG11-204ENST00000557866 RHOVQ96L33 236 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms