RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 SPSB4Q96A44 273 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 HAVCR1Q96D42 359 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 MYCBPQ99417 103 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 NOTCH2Q04721 2471 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 DSCAMO60469 2012 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 A0A1W2PPW3 197 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 ACOD1A6NK06 481 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 P2RY10O00398 339 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 RAC2P15153 192 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 WNT4P56705 351 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 FAM3AP98173 230 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 EFNB3Q15768 340 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 C11orf71Q6IPW1 123 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 DTX2Q86UW9 622 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 COMMD2Q86X83 199 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-213ENST00000557644 MND1Q9BWT6 205 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 MOB1AQ9H8S9 216 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 TAAR3PQ9P1P4 343 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 PURGQ9UJV8 347 aaKnown RBP13.07□□□□□ -0.32
NEDD1-213ENST00000557644 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
NEDD1-213ENST00000557644 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 A0A0U1RQV5 110 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 B9A039 149 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 TUBG1P23258 451 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 TNK1Q13470 666 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
NEDD1-213ENST00000557644 FDX2Q6P4F2 183 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 ST6GALNAC2Q9UJ37 374 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 PLEKHA6Q9Y2H5 1048 aa13.07□□□□□ -0.32
NEDD1-213ENST00000557644 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 hCG_38984A0A1B0GV85 526 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 TIMM8AO60220 97 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-213ENST00000557644 SELENOVP59797 346 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 MED22Q15528 200 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 FAM71F1Q96KD3 344 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-213ENST00000557644 CCL19Q99731 98 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 MSL2Q9HCI7 577 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 VPS13CQ709C8 3753 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 A0A1B0GTI1 187 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 OR4C45A6NMZ5 311 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 H3BSA7 217 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 ZFPL1O95159 310 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 IGLV3-1P01715 115 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 NAT2P11245 290 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 KITLGP21583 273 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 ACKR3P25106 362 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 GSK3AP49840 483 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 NKPD1Q17RQ9 610 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 KCTD21Q4G0X4 260 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 PAMR1Q6UXH9 720 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 SPARTQ8N0X7 666 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 IGFBPL1Q8WX77 278 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 RGCCQ9H4X1 137 aa13.06□□□□□ -0.32
NEDD1-213ENST00000557644 TRBV2A0A0J9YWF9 115 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 GGT3PA6NGU5 568 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CDKN1AP38936 164 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 TGM4P49221 684 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 EVX1P49640 407 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 MMP15P51511 669 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CDK5R1Q15078 307 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 SPHARQ15513 63 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 OR10AC1Q8NH08 325 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CACNG6Q9BXT2 260 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 TRIM36Q9NQ86 728 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 TNFAIP8O95379 198 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CD53P19397 219 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 CCR9P51686 369 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 SNRPD2P62316 118 aaKnown RBP13.05□□□□□ -0.32
NEDD1-213ENST00000557644 Q6ZR03 302 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 OR51A4Q8NGJ6 313 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 PDZD2O15018 2839 aa13.05□□□□□ -0.32
NEDD1-213ENST00000557644 A6NIN4 97 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 M0R233 179 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 SLC3A1Q07837 685 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 MRPL28Q13084 256 aaKnown RBP13.04□□□□□ -0.32
NEDD1-213ENST00000557644 OR8B8Q15620 311 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
NEDD1-213ENST00000557644 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms