RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FBP1P09467 338 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CXCL8P10145 99 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 MCF2P10911 925 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CBR1P16152 277 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 FGF9P31371 208 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 RPL35P42766 123 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 DIO3P55073 304 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 COPZ1P61923 177 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SKP1P63208 163 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 DEFA6Q01524 100 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 EGFEM1PQ0D2K5 195 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 MESDQ14696 234 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 GANABQ14697 944 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 PDK3Q15120 406 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 PRR30Q53SZ7 412 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SPATA46Q5T0L3 261 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SDHAF4Q5VUM1 108 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 UBE2UQ5VVX9 321 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 RSBN1Q5VWQ0 802 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 NANOGP8Q6NSW7 305 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 C1orf94Q6P1W5 598 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 IZUMO2Q6UXV1 221 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 NUDCD3Q8IVD9 361 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CTAGE3PQ8IX95 158 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ENTHD1Q8IYW4 607 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF679Q8IYX0 411 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CEND1Q8N111 149 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 OR2L13Q8N349 312 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SLC35F6Q8N357 371 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZCCHC7Q8N3Z6 543 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 OR52H1Q8NGJ2 320 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 AKR7LQ8NHP1 331 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF564Q8TBZ8 553 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 FAM172AQ8WUF8 416 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 EXOSC8Q96B26 276 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 OTUB2Q96DC9 234 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF317Q96PQ6 595 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 NPAS2Q99743 824 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 MAPKAP1Q9BPZ7 522 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 KCNS3Q9BQ31 491 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 PELOQ9BRX2 385 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF670Q9BS34 389 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 NIPSNAP3BQ9BS92 247 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 RAB34Q9BZG1 259 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 HDHD2Q9H0R4 259 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 METTL9Q9H1A3 318 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF385DQ9H6B1 395 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 POPDC2Q9HBU9 364 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZDHHC4Q9NPG8 344 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ASCL3Q9NQ33 180 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 RAB20Q9NX57 234 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CCDC59Q9P031 241 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 TMEM9Q9P0T7 183 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 TP53TG3Q9ULZ0 132 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CCL26Q9Y258 94 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 POLDIP2Q9Y2S7 368 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ASB4Q9Y574 426 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SLCO1B1Q9Y6L6 691 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 MN1Q10571 1320 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ANKRD11Q6UB99 2663 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 MTCL1Q9Y4B5 1905 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 IGF2RP11717 2491 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 A0A1B0GV90 55 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 LEUTXA8MZ59 168 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 E5RI56 91 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 J3QKU1 62 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 K7N7A8 449 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ITGB1BP1O14713 200 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TCAPO15273 167 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TOX3O15405 576 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF208O43345 1280 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT1A9O60656 530 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 HCN1O60741 890 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TBL1XO60907 577 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 LYPLA1O75608 230 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 IGHG4P01861 327 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SEMG1P04279 462 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 GP1BAP07359 652 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ANXA5P08758 320 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 CD3GP09693 182 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZDHHC11BP0C7U3 371 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 RALBP11234 206 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 COX4I1P13073 169 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 HLA-EP13747 358 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 IMPDH1P20839 514 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 PRPS1L1P21108 318 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 CPN2P22792 545 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 AQP1P29972 269 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT1A5P35504 534 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT2B10P36537 528 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 GPX4P36969 197 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 CRATP43155 626 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 MAGEA1P43355 309 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 DAP3P51398 398 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 PLK1P53350 603 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 RPS14P62263 151 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SEMG2Q02383 582 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF45Q02386 682 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SLC10A7Q0GE19 358 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms