RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 SLC26A1Q9H2B4 701 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 PTGES2Q9H7Z7 377 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 RNF122Q9H9V4 155 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 GHRLQ9UBU3 117 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 MMP17Q9ULZ9 603 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 MRPS28Q9Y2Q9 187 aaKnown RBP14.45□□□□□ -0.1
SHMT2-231ENST00000557433 HLA-DOBP13765 273 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
SHMT2-231ENST00000557433 MEOX2P50222 304 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 FOXK1P85037 733 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 FMODQ06828 376 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 PDZK1IP1Q13113 114 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 SQSTM1Q13501 440 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 TTLL10Q6ZVT0 673 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 POC1AQ8NBT0 407 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 OR13C9Q8NGT0 318 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 C11orf40Q8WZ69 217 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 DDIT4LQ96D03 193 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 DNAJA3Q96EY1 480 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 MICU1Q9BPX6 476 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 ACKR4Q9NPB9 350 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 B3GALT5Q9Y2C3 310 aa14.45□□□□□ -0.1
SHMT2-231ENST00000557433 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 IGHV5-51A0A0C4DH38 117 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 A0A1W2PNV4 684 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 CDC14CA4D256 554 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 CDC14BO60729 498 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 ADH6P28332 368 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 NPBWR1P48145 328 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 HSD11B2P80365 405 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 TLE3Q04726 772 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 IL15RAQ13261 267 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 THEM4Q5T1C6 240 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 RTL6Q6ICC9 239 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 GLIPR1L1Q6UWM5 242 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 COX15Q7KZN9 410 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 EMG1Q92979 244 aaKnown RBP14.44□□□□□ -0.1
SHMT2-231ENST00000557433 OR5B2Q96R09 309 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 TMEM59Q9BXS4 323 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 PARP11Q9NR21 331 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 SMCO4Q9NRQ5 59 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 ALKBH4Q9NXW9 302 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 PIAS3Q9Y6X2 628 aa14.44□□□□□ -0.1
SHMT2-231ENST00000557433 CACNA1CQ13936 2221 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 LOC101059948A0A1B0GTJ6 334 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ZNF878C9JN71 531 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 PRSS44E7EML9 344 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 MFNGO00587 321 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CA11O75493 328 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 GAPDHP04406 335 aaKnown RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 LAP3P28838 519 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 SULT1A2P50226 295 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 RAB5BP61020 215 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 PEA15Q15121 130 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 PPA1Q15181 289 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 GFOD2Q3B7J2 385 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 C15orf54Q8N8G6 183 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 TMEM41AQ96HV5 264 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 TGM7Q96PF1 710 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 SEC61A2Q9H9S3 476 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ASH2LQ9UBL3 628 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 RNASEK-C17orf49H0YIS7 233 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 H3BMH7 237 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ZNF217O75362 1048 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CST4P01036 141 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CRYBA1P05813 215 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CD5P06127 495 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CCL1P22362 96 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 OR1D4P47884 311 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 SRSF3P84103 164 aaKnown RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 POU3F1Q03052 451 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 C17orf67Q0P5P2 114 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 NSDHLQ15738 373 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 TMPRSS9Q7Z410 1059 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 TMEM200AQ86VY9 491 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 C17orf82Q86X59 251 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ADPRHL1Q8NDY3 354 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 LILRB1Q8NHL6 650 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ZNF768Q9H5H4 540 aaKnown RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 ESRP2Q9H6T0 727 aaKnown RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 METTL8Q9H825 291 aaKnown RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 CERS4Q9HA82 394 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 OSGIN2Q9Y236 505 aa14.43□□□□□ -0.1
SHMT2-231ENST00000557433 RPH3AQ9Y2J0 694 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-231ENST00000557433 A0A1W2PPC4 97 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 FBXO24O75426 580 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 WISP1O95388 367 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 MPIG6BO95866 241 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 MUC1P15941 1255 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-231ENST00000557433 AMY2BP19961 511 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 FBLP22087 321 aaKnown RBP14.42□□□□□ -0.1
SHMT2-231ENST00000557433 OR3A2P47893 321 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 NPY4RP50391 375 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 F2RL1P55085 397 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 PLAC9Q5JTB6 97 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 C9orf50Q5SZB4 431 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 OR5AS1Q8N127 324 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 FAM89BQ8N5H3 189 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 COMMD1Q8N668 190 aa14.42□□□□□ -0.1
SHMT2-231ENST00000557433 OR2AJ1Q8NGZ0 328 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms