RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 REEP4Q9H6H4 257 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TMEM231Q9H6L2 316 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 KAT8Q9H7Z6 458 aaKnown RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 GORASP2Q9H8Y8 452 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NANOGQ9H9S0 305 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LYRM4Q9HD34 91 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LHX9Q9NQ69 397 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ARMC1Q9NVT9 282 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LYARQ9NX58 379 aaKnown RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 THUMPD1Q9NXG2 353 aaKnown RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 C6orf203Q9P0P8 240 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 ZNF282Q9UDV7 671 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 PHF11Q9UIL8 331 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ANGPTL2Q9UKU9 493 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FZR1Q9UM11 496 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PSMD13Q9UNM6 376 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 KLHDC2Q9Y2U9 406 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FIS1Q9Y3D6 152 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 POLR3HQ9Y535 204 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 SLC22A7Q9Y694 548 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PTPRZ1P23471 2315 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 ACACAQ13085 2346 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TNRC6AQ8NDV7 1962 aaKnown RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 ALPK2Q86TB3 2170 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NCKAP5O14513 1909 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CACNA1CQ13936 2221 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TRBV7-9A0A0J9YWB2 115 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GNG14A0A1W2PPG7 69 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 KRT87PA6NCN2 255 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GABRR3A8MPY1 467 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 EVPLLA8MZ36 301 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 H3BMH7 237 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 BTN3A3O00478 584 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 RFXANKO14593 260 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR1F1O43749 312 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 DUX1O43812 170 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ENTPD5O75356 428 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 PSMG1O95456 288 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 NSA2O95478 260 aaKnown RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 STAMBPO95630 424 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 KRT75O95678 551 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GP1BAP07359 652 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 DCNP07585 359 aaKnown RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 GIMD1P0DJR0 217 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GGT1P19440 569 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 MAGP20916 626 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 BCKDHBP21953 392 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 UQCRC2P22695 453 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ATP5A1P25705 553 aaKnown RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 PSMB5P28074 263 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 S100A3P33764 101 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 MAGEA2P43356 314 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GABRA4P48169 554 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GZMMP51124 257 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 C21orf59P57076 290 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 RGS1Q08116 209 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 FLOT2Q14254 428 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 MPPED2Q15777 294 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 SNCBQ16143 134 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ACSF3Q4G176 576 aaPredicted RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 PAGE3Q5JUK9 113 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TMEM31Q5JXX7 168 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CPTPQ5TA50 214 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 C1orf146Q5VVC0 180 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 MEDAGQ5VYS4 303 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR52E8Q6IFG1 317 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 SLC48A1Q6P1K1 146 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 SCIMPQ6UWF3 145 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CCDC80Q76M96 950 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ABHD13Q7L211 337 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 VN1R4Q7Z5H5 301 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 DHFR2Q86XF0 187 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 MSRB3Q8IXL7 192 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 KDM8Q8N371 416 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZNF740Q8NDX6 193 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CATSPER1Q8NEC5 780 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR4F17Q8NGA8 305 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR4E2Q8NGC2 313 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR4C6Q8NH72 309 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR10G6Q8NH81 332 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CCL4L1Q8NHW4 92 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZNF675Q8TD23 568 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZFP90Q8TF47 636 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 C16orf78Q8WTQ4 265 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 RLN3Q8WXF3 142 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR5P2Q8WZ92 322 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 NAT6Q93015 286 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 STMN2Q93045 179 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 PPCDCQ96CD2 204 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TM4SF18Q96CE8 201 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 NEURL3Q96EH8 262 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 PPP1R36Q96LQ0 422 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZNF578Q96N58 590 aaPredicted RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 PRAP1Q96NZ9 151 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TSSK3Q96PN8 268 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR4F4Q96R69 305 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 OR52E6Q96RD3 313 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 HBEGFQ99075 208 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 NPAS2Q99743 824 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 NMNAT2Q9BZQ4 307 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms