RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CPEB2Q7Z5Q1 589 aaKnown RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 GMPPAQ96IJ6 420 aaPredicted RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 GP1BAP07359 652 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 SDC1P18827 310 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 EXOSC2Q13868 293 aaKnown RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 PQLC3Q8N755 202 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 PNPLA1Q8N8W4 532 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 ACPTQ9BZG2 426 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 APOBEC3GQ9HC16 384 aaKnown RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 A0A1W2PP55 124 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 GYPBP06028 91 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 GABRB1P18505 474 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 IRS1P35568 1242 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 SRP9P49458 86 aaKnown RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 PRLHRP49683 370 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 CLDN17P56750 224 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 FCRLBQ6BAA4 426 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 DPPA3Q6W0C5 159 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 VRK2Q86Y07 508 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 FAM169BQ8N8A8 192 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 H7C1C5 153 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 LINC01387J3KSC0 135 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 FGF18O76093 207 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 TYMSP04818 313 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 RAB38P57729 211 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 NUP37Q8NFH4 326 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 ASIC5Q9NY37 505 aa8.07□□□□□ -1.12
SYNE3-205ENST00000557275 PTRH2Q9Y3E5 179 aaKnown RBP8.07□□□□□ -1.12
SYNE3-205ENST00000557275 A0A0G2JLL6 359 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MFSD2BA6NFX1 497 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 CD82P27701 267 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 YPEL5P62699 121 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FAM3AP98173 230 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 C19orf57Q0VDD7 668 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PAQR6Q6TCH4 344 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 RBPMS2Q6ZRY4 209 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 H1FNTQ75WM6 255 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PRRT2Q7Z6L0 340 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 A0A1W2PPC4 97 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 SERINC4A6NH21 518 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM176BQ3YBM2 270 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 NLGN4XQ8N0W4 816 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 SLC17A4Q9Y2C5 497 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 WNT6Q9Y6F9 365 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 BCL9O00512 1426 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 CSO75390 466 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PPP1R1CQ8WVI7 109 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MRPS24Q96EL2 167 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 CTSFQ9UBX1 484 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 TSPAN13O95857 204 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 KIR3DL2P43630 455 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PARS2Q7L3T8 475 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 CAMKMTQ7Z624 323 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ABCA7Q8IZY2 2146 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ZDHHC22Q8N966 263 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 GPR137Q96N19 417 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 SLC5A6Q9Y289 635 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 GPR37O15354 613 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 COCHO43405 550 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF141Q15928 474 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM88Q6PEY1 159 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 F5H697 171 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ELAVL4P26378 380 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FOXO1Q12778 655 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 NKAIN1Q4KMZ8 207 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 OR2A25A4D2G3 310 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 HIST1H1EP10412 219 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PIGAP37287 484 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FZD2Q14332 565 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 SYS1Q8N2H4 156 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MOB3AQ96BX8 217 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PLA2G12AQ9BZM1 189 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MRPS2Q9Y399 296 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 LAMB1P07942 1786 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FAM171A2A8MVW0 826 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FZD9O00144 591 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MELTFP08582 738 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 SLC6A1P30531 599 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 FUT2Q10981 343 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 PRSS42Q7Z5A4 293 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ZBTB44Q8NCP5 570 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 OR2T10Q8NGZ9 312 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 N4BP2Q86UW6 1770 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 MON2Q7Z3U7 1717 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 EIF4E2O60573 245 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 RGRP47804 291 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 RPS16P62249 146 aaKnown RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 RXFP4Q8TDU9 374 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 OR51B6Q9H340 312 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ADGRL4Q9HBW9 690 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 OR8G3PP0DMU2 310 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 LRRC15Q8TF66 581 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 CSF3RQ99062 836 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF2Q9BSG1 426 aaPredicted RBP8.06□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM208Q9BTX3 173 aa8.06□□□□□ -1.12
SYNE3-205ENST00000557275 WASHC3Q9Y3C0 194 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms