RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 RNF212Q495C1 297 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF660Q6AZW8 331 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RPL7L1Q6DKI1 246 aaKnown RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR5M8Q8NGP6 311 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ROBO4Q8WZ75 1007 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CCDC74AQ96AQ1 378 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RBMXL1Q96E39 390 aaKnown RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MAP3K3Q99759 626 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 GPR84Q9NQS5 396 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TUBG2Q9NRH3 451 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 HCFC2Q9Y5Z7 792 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PIAS3Q9Y6X2 628 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 C7orf66A4D0T2 115 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 JTBO76095 146 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CEACAM5P06731 702 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SERPINE2P07093 398 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 NMBP08949 121 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TNFRSF4P43489 277 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PJVKQ0ZLH3 352 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 FAM53BQ14153 422 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PDCD1Q15116 288 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TAF9Q16594 264 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 C21orf62-AS1Q17RA5 79 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM176BQ3YBM2 270 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PWWP2BQ6NUJ5 590 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 COMMD1Q8N668 190 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR52N4Q8NGI2 321 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ARHGAP5-AS1Q96IT6 56 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MEGF10Q96KG7 1140 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 LURAP1Q96LR2 239 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SIGLEC11Q96RL6 698 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SPIN2AQ99865 258 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SPIN2BQ9BPZ2 258 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 FOXQ1Q9C009 403 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OPA3Q9H6K4 179 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TNFSF18Q9UNG2 199 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 A0A087WUJ7 227 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CCDC187A0A096LP49 1063 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CXorf65A6NEN9 183 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR6C6A6NF89 314 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 H0Y8G0 127 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 HRKO00198 91 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SLC17A2O00624 439 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ECI1P42126 302 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ID4P47928 161 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 HNRNPKP61978 463 aaKnown RBP eCLIP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 LTC4SQ16873 150 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ATPAF1Q5TC12 328 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 DGAT2L6Q6ZPD8 337 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 DOK3Q7L591 496 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZAR1Q86SH2 424 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 C20orf196Q8IYI0 205 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 NPEPL1Q8NDH3 523 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR10AC1Q8NH08 325 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CA5BP1Q8WTZ4 195 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RRNAD1Q96FB5 475 aaKnown RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 REEP6Q96HR9 211 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MGAMO43451 1857 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 NSG1A0A0A6YYJ2 146 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 A0A1W2PPE2 198 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ARGFXA6NJG6 315 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 A8MVM7 634 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ADAP1O75689 374 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MT-ATP6P00846 226 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RAB4AP20338 218 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RAB1AP62820 205 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 C2orf68Q2NKX9 166 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SP6Q3SY56 376 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 VWA2Q5GFL6 755 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR8G2PQ6IF36 304 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 BRICD5Q6PL45 260 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 LCN15Q6UWW0 184 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZDHHC22Q8N966 263 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MOGAT1Q96PD6 335 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 KCNJ15Q99712 375 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MCM3APO60318 1980 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF727A8MUV8 499 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 E5RGE8 158 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TNFSF11O14788 317 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 DFFBO76075 338 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 YIF1AO95070 293 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 IGKV1D-16P01601 117 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 MUC1P15941 1255 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CD1CP29017 333 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LIMK1P53667 647 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 FGF8P55075 233 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 H2BFSP57053 126 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CARD18P57730 90 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 GRB2P62993 217 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TOMM34Q15785 309 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF684Q5T5D7 378 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF787Q6DD87 383 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 H1FNTQ75WM6 255 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 MRPL21Q7Z2W9 205 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LGI3Q8N145 548 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR4F5Q8NH21 305 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR4F4Q96R69 305 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms