RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PCDHGB1Q9Y5G3 927 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 R4GMQ9 66 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF469Q96JG9 3925 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-225ENST00000556798 hCG_38984A0A1B0GV85 526 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 LOC110117498-PIK3R3F6TDL0 507 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 FADS2O95864 444 aaKnown RBP14.87□□□□□ -0.03
SHMT2-225ENST00000556798 VHLP40337 213 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 FAM3AP98173 230 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 PCGF3Q3KNV8 242 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 ZMAT1Q5H9K5 638 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 LIPNQ5VXI9 398 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 CLEC2AQ6UVW9 174 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 DNM1P46Q6ZS02 220 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 FAM220AQ7Z4H9 259 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 LHFPL3Q86UP9 236 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 TGIF2LYQ8IUE0 185 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 UBASH3BQ8TF42 649 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 FBLIM1Q8WUP2 373 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 ELMOD3Q96FG2 381 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 LYZL4Q96KX0 146 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 SIGLEC11Q96RL6 698 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 ALG8Q9BVK2 526 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 OPA3Q9H6K4 179 aa14.87□□□□□ -0.03
SHMT2-225ENST00000556798 MRPS18AQ9NVS2 196 aaKnown RBP14.87□□□□□ -0.03
SHMT2-225ENST00000556798 MED13LQ71F56 2210 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 IGHV4-30-2A0A087WSY4 118 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 H0YL77 283 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 MLNRO43193 412 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 CDC14BO60729 498 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 FAM20BO75063 409 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 SULT1C4O75897 302 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 IGHA1P01876 353 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 HLA-DPB1P04440 258 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 PSMB10P40306 273 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 MMP16P51512 607 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 OR12D2P58182 307 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 HNRNPA0Q13151 305 aaKnown RBP14.86□□□□□ -0.03
SHMT2-225ENST00000556798 TNK1Q13470 666 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 CDONQ4KMG0 1287 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 KLHL22Q53GT1 634 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 BCL2L15Q5TBC7 163 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 COMMD2Q86X83 199 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 FAM168AQ92567 244 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 DVL3Q92997 716 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-225ENST00000556798 SLC30A2Q9BRI3 323 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 SAP30LQ9HAJ7 183 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 G6PC2Q9NQR9 355 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 DECR2Q9NUI1 292 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 NUFIP1Q9UHK0 495 aaKnown RBP14.86□□□□□ -0.03
SHMT2-225ENST00000556798 OR52A1Q9UKL2 312 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 ZDHHC8Q9ULC8 765 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 HIVEP1P15822 2718 aa14.86□□□□□ -0.03
SHMT2-225ENST00000556798 ACOD1A6NK06 481 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 XPNPEP2O43895 674 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 TTRP02766 147 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 ADH4P08319 380 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 COL8A2P25067 703 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 GSK3AP49840 483 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 PDLIM4P50479 330 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 TNFAIP6P98066 277 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-225ENST00000556798 FAM209AQ5JX71 171 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 OR13G1Q8NGZ3 307 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 C10orf105Q8TEF2 133 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 RORBQ92753 470 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 YIPF5Q969M3 257 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 C4orf36Q96KX1 117 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF649Q9BS31 505 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 RGCCQ9H4X1 137 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 MOB1AQ9H8S9 216 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 FGF20Q9NP95 211 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-225ENST00000556798 GPR84Q9NQS5 396 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 TMEM100Q9NV29 134 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 ERVK13-1Q9NX77 482 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 NKIRAS2Q9NYR9 191 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 TREM2Q9NZC2 230 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 SLC22A13Q9Y226 551 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 SNX5Q9Y5X3 404 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 CACNG2Q9Y698 323 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 F8P00451 2351 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 ACANP16112 2415 aa14.85□□□□□ -0.03
SHMT2-225ENST00000556798 IGHV3-64DA0A0J9YX35 117 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 J3QLW9 94 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CD55P08174 381 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CSF3P09919 207 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF19P17023 458 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CA6P23280 308 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CFL1P23528 166 aaKnown RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 RBMXP38159 391 aaKnown RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 HSPA13P48723 471 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ACTA2P62736 377 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ACTG2P63267 376 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 GALEQ14376 348 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ODF4Q2M2E3 257 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CATSPERDQ86XM0 798 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 CIARTQ8N365 385 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF786Q8N393 782 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 BPIFB6Q8NFQ5 453 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 OR51E1Q8TCB6 317 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ITLN1Q8WWA0 313 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 GGHQ92820 318 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms