RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 M0R135 149 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 PLPP2O43688 288 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 PRKYO43930 277 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 TNFAIP8O95379 198 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 SPARCP09486 303 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF823P16415 610 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 PAICSP22234 425 aaKnown RBP8.7□□□□□ -1.02
SHMT2-224ENST00000556737 TNFSF4P23510 183 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ENTPD1P49961 510 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ISL1P61371 349 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 RPS7P62081 194 aaKnown RBP8.7□□□□□ -1.02
SHMT2-224ENST00000556737 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
SHMT2-224ENST00000556737 SLC3A1Q07837 685 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ZMYND11Q15326 602 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 TEX30Q5JUR7 227 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 C1orf229Q6ZS94 237 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-224ENST00000556737 BHLHE23Q8NDY6 225 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 OR5L1Q8NGL2 311 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 OR8J1Q8NGP2 316 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 UBE2FQ969M7 185 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF799Q96GE5 643 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 MEGF10Q96KG7 1140 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 GAL3ST1Q99999 423 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 CDADC1Q9BWV3 514 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 MARCH7Q9H992 704 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 GCM1Q9NP62 436 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 SCN3BQ9NY72 215 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 NPTNQ9Y639 398 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 STAB1Q9NY15 2570 aa8.7□□□□□ -1.02
SHMT2-224ENST00000556737 ISPDA4D126 451 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 MAGEA13PA6NCF6 341 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SNTNA6NMZ2 147 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 RNF212BA8MTL3 300 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 PRR23D1E9PI22 279 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-224ENST00000556737 F5H0A9 414 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-224ENST00000556737 F5H5P2 479 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SLC1A7O00341 560 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SURF4O15260 269 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 PNPP00491 289 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 AVPP01185 164 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 PRR23D2P0DMB1 279 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TNFRSF1AP19438 455 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 PCMT1P22061 227 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TPTEP56180 551 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 KLHL12Q53G59 568 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 RBM48Q5RL73 367 aaKnown RBP8.69□□□□□ -1.02
SHMT2-224ENST00000556737 C6orf141Q5SZD1 244 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 GLYATL3Q5SZD4 288 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TIGD4Q8IY51 512 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 OR6K6Q8NGW6 343 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 OR2AE1Q8NHA4 323 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TMEM163Q8TC26 289 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TRUB1Q8WWH5 349 aaKnown RBP8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SPTSSAQ969W0 71 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 SLAMF6Q96DU3 332 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 AMELYQ99218 206 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 CCDC90BQ9GZT6 254 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 PPP1R3CQ9UQK1 317 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 TPRKBQ9Y3C4 175 aa8.69□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF878C9JN71 531 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 PTGES3LE9PB15 166 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 TMEM178BH3BS89 294 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 XPNPEP2O43895 674 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 ENTPD6O75354 484 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 LCATP04180 440 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 HLA-DPB1P04440 258 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 LYNP07948 512 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SLC2A1P11166 492 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SELEP16581 610 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 ZFP36P26651 326 aaKnown RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 PMELP40967 661 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SEC61A1P61619 476 aaKnown RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SNRPGP62308 76 aaKnown RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 BTG1P62324 171 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF92Q03936 586 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 MAB21L1Q13394 359 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SMN1Q16637 294 aaKnown RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 TMEM155Q4W5P6 130 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 MEDAGQ5VYS4 303 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 PLBD1Q6P4A8 553 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 DRAM2Q6UX65 266 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 BCDIN3DQ7Z5W3 292 aaKnown RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 CPOQ8IVL8 374 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 OR13G1Q8NGZ3 307 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 RHOXF1Q8NHV9 184 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF420Q8TAQ5 688 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 RNF133Q8WVZ7 376 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 APH1BQ8WW43 257 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF582Q96NG8 517 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-224ENST00000556737 KCNJ15Q99712 375 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 COPS4Q9BT78 406 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 OR51V1Q9H2C8 321 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 AMBNQ9NP70 447 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 SNX5Q9Y5X3 404 aa8.68□□□□□ -1.02
SHMT2-224ENST00000556737 LOC105371242A0A075B767 164 aa8.67□□□□□ -1.02
SHMT2-224ENST00000556737 IGHV3-64DA0A0J9YX35 117 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms