RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TMEM100Q9NV29 134 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 DCAF16Q9NXF7 216 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 TREM2Q9NZC2 230 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 PPP1R3CQ9UQK1 317 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SVEP1Q4LDE5 3571 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 ISPDA4D126 451 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 GGT3PA6NGU5 568 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 FAM157AC9JC47 383 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 F5H5P2 479 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 H0YL77 283 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 IGHV2-70P01814 119 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 MSMBP08118 114 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 FAM157CP0CG43 387 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 ALOX5APP20292 161 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 HNF1AP20823 631 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 PCMT1P22061 227 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 GATA4P43694 442 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF121P58317 390 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-205ENST00000556310 EFNB1P98172 346 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 AADACL4Q5VUY2 407 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 PRSS45Q7RTY3 260 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 GLCCI1Q86VQ1 547 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 PRIMA1Q86XR5 153 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 CELF2-AS1Q8N7Q2 184 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 TCEANCQ8N8B7 351 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 OR52H1Q8NGJ2 320 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 OR51F2Q8NH61 342 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 TMEM163Q8TC26 289 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 THEM6Q8WUY1 208 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 RAB3IPQ96QF0 476 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-205ENST00000556310 SIGLEC11Q96RL6 698 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 CNN2Q99439 309 aaKnown RBP9.73□□□□□ -0.85
SLIRP-205ENST00000556310 TEAD3Q99594 435 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 PKP2Q99959 881 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 GAL3ST1Q99999 423 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 ADAT1Q9BUB4 502 aaKnown RBP9.73□□□□□ -0.85
SLIRP-205ENST00000556310 NIPAL2Q9H841 368 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 DNAJC27Q9NZQ0 273 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 MRPL15Q9P015 296 aaKnown RBP9.73□□□□□ -0.85
SLIRP-205ENST00000556310 LAMP5Q9UJQ1 280 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 NPTNQ9Y639 398 aa9.73□□□□□ -0.85
SLIRP-205ENST00000556310 SLC22A31A6NKX4 558 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 TBX1O43435 398 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 HLA-DPB1P04440 258 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 MRPL3P09001 348 aaKnown RBP9.72□□□□□ -0.85
SLIRP-205ENST00000556310 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
SLIRP-205ENST00000556310 DDOSTP39656 456 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 CD200P41217 278 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 RAD23AP54725 363 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 BTG1P62324 171 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 HNRNPA0Q13151 305 aaKnown RBP9.72□□□□□ -0.85
SLIRP-205ENST00000556310 OR8G1Q15617 311 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 TIGD6Q17RP2 521 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF181Q2M3W8 571 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 CR1LQ2VPA4 569 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 FAM120AOSQ5T036 256 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 LRRN1Q6UXK5 716 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 FAM57BQ71RH2 274 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 MEPCEQ7L2J0 689 aaKnown RBP9.72□□□□□ -0.85
SLIRP-205ENST00000556310 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-205ENST00000556310 GID4Q8IVV7 300 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 TMEM186Q96B77 213 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 REEP6Q96HR9 211 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 BEX2Q9BXY8 128 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 OR10A2Q9H208 303 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 RIBC2Q9H4K1 309 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 RGCCQ9H4X1 137 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 USE1Q9NZ43 259 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 LRP12Q9Y561 859 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 N6AMT1Q9Y5N5 214 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 TMEM14AQ9Y6G1 99 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 WNK2Q9Y3S1 2297 aa9.72□□□□□ -0.85
SLIRP-205ENST00000556310 CUBNO60494 3623 aa9.71□□□□□ -0.85
SLIRP-205ENST00000556310 TRAV20A0A0B4J274 112 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 hCG_38984A0A1B0GV85 526 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 TMEM178BH3BS89 294 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 EI24O14681 340 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 GMDSO60547 372 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 ALPLP05186 524 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 ANPEPP15144 967 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 CA6P23280 308 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 POLR2IP36954 125 aaKnown RBP9.71□□□□□ -0.86
SLIRP-205ENST00000556310 FAM3AP98173 230 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 ROM1Q03395 351 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 MAB21L1Q13394 359 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 ZMYND11Q15326 602 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 KCTD18Q6PI47 426 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-205ENST00000556310 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.86
SLIRP-205ENST00000556310 KRT77Q7Z794 578 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 MOGAT3Q86VF5 341 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 KLBQ86Z14 1044 aa9.71□□□□□ -0.86
SLIRP-205ENST00000556310 MUC20Q8N307 709 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms