RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TAS2R43P59537 309 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 ACTR3P61158 418 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 RPL23AP62750 156 aaKnown RBP0.67□□□□□ -2.3
SRP54-207ENST00000555535 HMGN5P82970 282 aaKnown RBP0.67□□□□□ -2.3
SRP54-207ENST00000555535 SEMG2Q02383 582 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 SIGLEC14Q08ET2 396 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 PNOCQ13519 176 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 TRAM2Q15035 370 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 SSX2Q16385 188 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 GCSAMLQ5JQS6 135 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 C1orf185Q5T7R7 199 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 FAM222AQ5U5X8 452 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 UBE2UQ5VVX9 321 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 C22orf42Q6IC83 251 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 PRSS54Q6PEW0 395 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 DEGS2Q6QHC5 323 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 NPSR1Q6W5P4 371 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 CDR2LQ86X02 465 aaPredicted RBP0.67□□□□□ -2.3
SRP54-207ENST00000555535 OR2Z1Q8NG97 314 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 OR4M1Q8NGD0 313 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 OR56B2PQ8NGI1 322 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 OR13C2Q8NGS9 318 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 RXFP4Q8TDU9 374 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 ACMSDQ8TDX5 336 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 CDS1Q92903 461 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 NT5C3BQ969T7 300 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 HAUS1Q96CS2 278 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 OTUB2Q96DC9 234 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 NRBF2Q96F24 287 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 C18orf15Q96N68 181 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 CRACR2AQ9BSW2 395 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 SAMD10Q9BYL1 202 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 ACP6Q9NPH0 428 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 DYRK4Q9NR20 520 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 RGS18Q9NS28 235 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 RWDD2AQ9UIY3 292 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 LRRC42Q9Y546 428 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 ATG2BQ96BY7 2078 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 LCTP09848 1927 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 MYO9BQ13459 2157 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 ATAD2BQ9ULI0 1458 aa0.67□□□□□ -2.3
SRP54-207ENST00000555535 MPDZO75970 2070 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 PLXNB3Q9ULL4 1909 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 TRAV6A0A075B6T7 132 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 ISPDA4D126 451 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 SDHAF1A6NFY7 115 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 OR2AG2A6NM03 316 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 C3orf84H3BNL1 204 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 CLDN34H7C241 214 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 SIRPB1O00241 398 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 TNFRSF11BO00300 401 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 NME4O00746 187 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 CXCL11O14625 94 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 GATBO75879 557 aaKnown RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 SCO1O75880 301 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 CCNB2O95067 398 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 NRASP01111 189 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 HRASP01112 189 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 KRASP01116 189 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 LHBP01229 141 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 FTH1P02794 183 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 MT-ND4P03905 459 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 IGLV7-43P04211 117 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 TROVE2P10155 538 aaKnown RBP eCLIP0.66□□□□□ -2.3
SRP54-207ENST00000555535 MYL2P10916 166 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 HRES1P13985 223 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 PRPS1L1P21108 318 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 SLC1A2P43004 574 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 UQCRFS1P47985 274 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 IDH2P48735 452 aaKnown RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 ELF3P78545 371 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 PRR3P79522 188 aaKnown RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 PPIDQ08752 370 aaKnown RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 PGGHGQ32M88 737 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 ZNF829Q3KNS6 432 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 XKR7Q5GH72 579 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 ERO1BQ86YB8 467 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 IQCKQ8N0W5 287 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 GTPBP8Q8N3Z3 284 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 SLC35G3Q8N808 338 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 SPANXA2-OT1Q8N9U9 137 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 UBAC2Q8NBM4 344 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 KLF14Q8TD94 323 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 SLC2A14Q8TDB8 520 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 FXYD5Q96DB9 178 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 SEH1LQ96EE3 360 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 OR4K3Q96R72 315 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 PANX1Q96RD7 426 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 C20orf24Q9BUV8 137 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 NUP58Q9BVL2 599 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 ACTR3CQ9C0K3 210 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 SLC7A5P2Q9GIP4 190 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 FAM192AQ9GZU8 254 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 TMEM38AQ9H6F2 299 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 RRAGDQ9NQL2 400 aaPredicted RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 PARP11Q9NR21 331 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 ASF1BQ9NVP2 202 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 DCAF16Q9NXF7 216 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 TMCC3Q9ULS5 477 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 HES2Q9Y543 173 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms