RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SAXO1Q8IYX7 474 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 KIF2BQ8N4N8 673 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 GPR26Q8NDV2 337 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 TMEM104Q8NE00 496 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 OR10G2Q8NGC3 310 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 NDNFQ8TB73 568 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 CCDC12Q8WUD4 166 aaPredicted RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 ZNF396Q96N95 335 aaPredicted RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 GPR21Q99679 349 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 HSD17B10Q99714 261 aaKnown RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 BBS2Q9BXC9 721 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 SLIRPQ9GZT3 109 aaKnown RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 OR2AG1Q9H205 316 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 TMEM27Q9HBJ8 222 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 ADA2Q9NZK5 511 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 CHMP5Q9NZZ3 219 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 BRD4O60885 1362 aaPredicted RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 LRP4O75096 1905 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 IQCF5A8MTL0 148 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 ZNF99A8MXY4 864 aaPredicted RBP3.36□□□□□ -1.87
VRK1-205ENST00000555402 ANKRD65E5RJM6 399 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 CTDNEP1O95476 244 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 S100A6P06703 90 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 CTSLP07711 333 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 PGA5P0DJD9 388 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 CD37P11049 281 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 TAS2R46P59540 309 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 SLC39A6Q13433 755 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 GPR176Q14439 515 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 TSC22D1Q15714 1073 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 SMUG1Q53HV7 270 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 GCSAMLQ5JQS6 135 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 AVPI1Q5T686 147 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 WDR82Q6UXN9 313 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 Q6ZVH6 145 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 FAM58AQ8N1B3 248 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 SYNPRQ8TBG9 265 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 DDI1Q8WTU0 396 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 PDCD6IPQ8WUM4 868 aaKnown RBP3.36□□□□□ -1.87
VRK1-205ENST00000555402 C15orf40Q8WUR7 153 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 STARD4Q96DR4 205 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 CAMK2N2Q96S95 79 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 GAL3ST2Q9H3Q3 398 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 CD209Q9NNX6 404 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 DDX19AQ9NUU7 478 aaKnown RBP3.36□□□□□ -1.87
VRK1-205ENST00000555402 IFNKQ9P0W0 207 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 ZNRD1Q9P1U0 126 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 STX18Q9P2W9 335 aaKnown RBP3.36□□□□□ -1.87
VRK1-205ENST00000555402 CD300AQ9UGN4 299 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 ADGRA3Q8IWK6 1321 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 PALLDQ8WX93 1383 aa3.36□□□□□ -1.87
VRK1-205ENST00000555402 GPATCH8Q9UKJ3 1502 aaKnown RBP3.35□□□□□ -1.87
VRK1-205ENST00000555402 TRAV6A0A075B6T7 132 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 RAD51BO15315 384 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 FOXH1O75593 365 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PGA4P0DJD7 388 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PGA3P0DJD8 388 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 NEFHP12036 1026 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PSMC3P17980 439 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 GABRG2P18507 467 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 LCN1P31025 176 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PFN2P35080 140 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 TALDO1P37837 337 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 CCNG1P51959 295 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 AP1S2P56377 157 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 ATP6V0D1P61421 351 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 ESRRGP62508 458 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 TNNC1P63316 161 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 TPRG1LQ5T0D9 272 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 C6orf183Q5T699 404 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 AP1ARQ63HQ0 302 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 NANOGP8Q6NSW7 305 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PTX4Q96A99 478 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 RBMXL1Q96E39 390 aaKnown RBP3.35□□□□□ -1.87
VRK1-205ENST00000555402 SGTBQ96EQ0 304 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 C8orf76Q96K31 380 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 BTN2A3PQ96KV6 586 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 SCGB3A2Q96PL1 93 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 TRNT1Q96Q11 434 aaKnown RBP3.35□□□□□ -1.87
VRK1-205ENST00000555402 PRRG3Q9BZD7 231 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 PATZ1Q9HBE1 687 aaKnown RBP3.35□□□□□ -1.87
VRK1-205ENST00000555402 PRSS16Q9NQE7 514 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 NACAE9PAV3 2078 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 MYO3BQ8WXR4 1341 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 FHOD3Q2V2M9 1422 aa3.35□□□□□ -1.87
VRK1-205ENST00000555402 IGHV1-69DA0A0B4J2H0 117 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 SLC22A20A6NK97 555 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 CENPXA8MT69 81 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 PDZK1P1A8MUH7 402 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 B4GALT5O43286 388 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 ERI3O43414 337 aaKnown RBP3.34□□□□□ -1.87
VRK1-205ENST00000555402 GLAP06280 429 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 CACNG7P62955 275 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms