RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OR6F1Q8NGZ6 308 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 PTX4Q96A99 478 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 BOD1Q96IK1 185 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 TAAR6Q96RI8 345 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 NKX3-1Q99801 234 aaPredicted RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 EXO5Q9H790 373 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 NOX3Q9HBY0 568 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 GPR84Q9NQS5 396 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 EMC3Q9P0I2 261 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 LOC100289279A0A1B0GTE1 492 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SYT7O43581 403 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SULT1B1O43704 296 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ZNF32P17041 273 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 CDK2P24941 298 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SLC6A1P30531 599 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 C2orf76Q3KRA6 126 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 IGSF11Q5DX21 431 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ZNF774Q6NX45 483 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 FAM57BQ71RH2 274 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 OR1F12Q8NHA8 337 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 RFT1Q96AA3 541 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SLC22A4Q9H015 551 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 AUNIPQ9H7T9 357 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 RBFOX1Q9NWB1 397 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 MCTS1Q9ULC4 181 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 GTF2A1LQ9UNN4 478 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 LAMA5O15230 3695 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 XRCC3O43542 346 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SYNGR4O95473 234 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ALDOBP05062 364 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 HAAOP46952 286 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 POU3F4P49335 361 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 PITPNAQ00169 270 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 GPR176Q14439 515 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ATAD3CQ5T2N8 411 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SFRP5Q5T4F7 317 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 GLCCI1Q86VQ1 547 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 IZUMO1Q8IYV9 350 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 CPEB3Q8NE35 698 aaKnown RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 OR51D1Q8NGF3 324 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 OR52N4Q8NGI2 321 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 OR6M1Q8NGM8 313 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SLC7A6Q92536 515 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 FAM3DQ96BQ1 224 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 CNTD2Q9H8S5 307 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 POLR1DQ9Y2S0 133 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 TRAV17A0A0B4J275 112 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 OR6C65A6NJZ3 312 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 M0R135 149 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 LYRM1O43325 122 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SGCEO43556 437 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 CD2P06729 351 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ABOP16442 354 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 HTR2CP28335 458 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 TALDO1P37837 337 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 PRKXP51817 358 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ART1P52961 327 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 TAS2R20P59543 309 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 UNC119Q13432 240 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 RAB11BQ15907 218 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 ESCO2Q56NI9 601 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 AGAP6Q5VW22 663 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 Q6ZS92 163 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 UTS2BQ765I0 119 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SGK3Q96BR1 496 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 UPRTQ96BW1 309 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 C10orf35Q96D05 121 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ZNF799Q96GE5 643 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 CGGBP1Q9UFW8 167 aaPredicted RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 MED12LQ86YW9 2145 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 MEGF11A6BM72 1044 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 DHRS7CA6NNS2 312 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 CENPXA8MT69 81 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 GABARAPH6UMI1 98 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 K7EM74 188 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 EEF1E1O43324 174 aaKnown RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 MRPL33O75394 65 aaKnown RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 DHRS3O75911 302 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 IL18BPO95998 194 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 S100A6P06703 90 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 RAB6AP20340 208 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 BDKRB2P30411 391 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 MAP2K3P46734 347 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 SRP9P49458 86 aaKnown RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 SPOCK1Q08629 439 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ZFP69Q49AA0 526 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 DRAM2Q6UX65 266 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 LINC00518Q8N0U6 118 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ZNF283Q8N7M2 679 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 RBMXL3Q8N7X1 1067 aaKnown RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 CCDC54Q8NEL0 328 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 ZNF671Q8TAW3 534 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 FOXRED1Q96CU9 486 aaPredicted RBP7.76□□□□□ -1.17
TDP1-210ENST00000554976 C1QTNF5Q9BXJ0 243 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 MMP28Q9H239 520 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 PARPBPQ9NWS1 579 aa7.76□□□□□ -1.17
TDP1-210ENST00000554976 TIMM10BQ9Y5J6 103 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms