RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 A0A1W2PQL4 384 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 GGT3PA6NGU5 568 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 SRSF10O75494 262 aaKnown RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 TACSTD2P09758 323 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 CA6P23280 308 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ACKR3P25106 362 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 LIPAP38571 399 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 GPR6P46095 362 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 MRPS11P82912 194 aaKnown RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ROM1Q03395 351 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 MVKQ03426 396 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF85Q03923 595 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF322Q6U7Q0 402 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 RHOUQ7L0Q8 258 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 OR13G1Q8NGZ3 307 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 CLDND2Q8NHS1 167 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF420Q8TAQ5 688 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 SPRYD4Q8WW59 207 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 CCL17Q92583 94 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 RNFT2Q96EX2 444 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 MEGF10Q96KG7 1140 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 AMBNQ9NP70 447 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 CLN6Q9NWW5 311 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 SMPD3Q9NY59 655 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 CGGBP1Q9UFW8 167 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 IKZF2Q9UKS7 526 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 J3QRE1 110 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 SLC16A6O15403 523 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 XRCC2O43543 280 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 MAB21L1Q13394 359 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 OCLNQ16625 522 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
SYNE2-214ENST00000554928 TIGD6Q17RP2 521 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ZMAT1Q5H9K5 638 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 SLC25A30Q5SVS4 291 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 FAM201AQ5SY85 155 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF684Q5T5D7 378 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 OGFRL1Q5TC84 451 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-214ENST00000554928 PRAMEF6Q5VXH4 476 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF679Q8IYX0 411 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 OR10H4Q8NGA5 316 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 RHOXF1Q8NHV9 184 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 NRG4Q8WWG1 115 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 TRUB1Q8WWH5 349 aaKnown RBP10.43□□□□□ -0.74
SYNE2-214ENST00000554928 SIGLEC11Q96RL6 698 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 DIRC2Q96SL1 478 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 FGF23Q9GZV9 251 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-214ENST00000554928 OR10A2Q9H208 303 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 TMEM100Q9NV29 134 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ABCA1O95477 2261 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ABCA2Q9BZC7 2435 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 ZFHX3Q15911 3703 aa10.43□□□□□ -0.74
SYNE2-214ENST00000554928 TMEM269A0A1B0GVZ9 245 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 INAFM1C9JVW0 142 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF670-ZNF695F2Z2N8 137 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 CASQ2O14958 399 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 CD5LO43866 347 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 WBP4O75554 376 aaKnown RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 RPP14O95059 124 aaKnown RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF205O95201 554 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 CYB5R3P00387 301 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MTNR1AP48039 350 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 GSK3AP49840 483 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MMP16P51512 607 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 TMEM33P57088 247 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF91Q05481 1191 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MPPED2Q15777 294 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 KCTD18Q6PI47 426 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 WDR86Q86TI4 376 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 ASB17Q8WXJ9 295 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MSI2Q96DH6 328 aaKnown RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 LGALS12Q96DT0 336 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 ADAT1Q9BUB4 502 aaKnown RBP10.42□□□□□ -0.74
SYNE2-214ENST00000554928 MROQ9BYG7 248 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 EGLN1Q9GZT9 426 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 PBOV1Q9GZY1 135 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 G6PC2Q9NQR9 355 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 TMEM106BQ9NUM4 274 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 IL19Q9UHD0 177 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 RHBDD3Q9Y3P4 386 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 TMEM14AQ9Y6G1 99 aa10.42□□□□□ -0.74
SYNE2-214ENST00000554928 LOC100289279A0A1B0GTE1 492 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 FAM157AC9JC47 383 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 CLDN25C9JDP6 229 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 TTRP02766 147 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 OR2T7P0C7T2 308 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 DBTP11182 482 aaKnown RBP10.41□□□□□ -0.74
SYNE2-214ENST00000554928 TNFSF4P23510 183 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 PSMB10P40306 273 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 RIDAP52758 137 aaKnown RBP10.41□□□□□ -0.74
SYNE2-214ENST00000554928 LMO4P61968 165 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 ADARB1P78563 741 aaKnown RBP10.41□□□□□ -0.74
SYNE2-214ENST00000554928 TMED1Q13445 227 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 OR8G1Q15617 311 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms