RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 A0A1W2PRS3 328 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF860A6NHJ4 632 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PCP4L1A6NKN8 68 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A8MUA0 341 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 KIR3DP1A8MWS1 328 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IDSB3KWA1 339 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DCTN6O00399 190 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CCL22O00626 93 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RGS16O15492 202 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UGT1A9O60656 530 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ATP5LO75964 103 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 KRT34O76011 436 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 LGI1O95970 557 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IGLV1-47P01700 117 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HPNP05981 417 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IVLP07476 585 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RBMY1CP0DJD4 496 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DBTP11182 482 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 COX6A1P12074 109 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ELK1P19419 428 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FUT3P21217 361 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CXCR2P25025 360 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CALCRP30988 508 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RPL13AP40429 203 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PTGDSP41222 190 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CCR8P51685 355 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 VSX2P58304 361 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 TPI1P60174 286 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HMGN5P82970 282 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FGL1Q08830 312 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CHIT1Q13231 466 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 GGTLC2Q14390 218 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HERPUD1Q15011 391 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 STK38Q15208 465 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NSUN5P1Q3KNT7 163 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SFT2D3Q587I9 215 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PRAMEF20Q5VT98 475 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 C1orf146Q5VVC0 180 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 OR4F3Q6IEY1 312 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 C11orf71Q6IPW1 123 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 Q6ZPB1 254 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RGS9BPQ6ZS82 235 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 COX15Q7KZN9 410 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CRLF3Q8IUI8 442 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FTMTQ8N4E7 242 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CEP112Q8N8E3 955 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SNX31Q8N9S9 440 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CCDC71LQ8N9Z2 235 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 GPR26Q8NDV2 337 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF740Q8NDX6 193 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FBXO30Q8TB52 745 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FAM172AQ8WUF8 416 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 LCN9Q8WX39 176 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF606Q8WXB4 792 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CHCHD10Q8WYQ3 142 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PSMF1Q92530 271 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UBE2E3Q969T4 207 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 COQ2Q96H96 371 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HSFY1Q96LI6 401 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF396Q96N95 335 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HIST1H4GQ99525 98 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NPAS2Q99743 824 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UTP23Q9BRU9 249 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 MED18Q9BUE0 208 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SELENOIQ9C0D9 397 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 POLR2J2Q9GZM3 115 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 POLR2J3Q9H1A7 115 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DHX35Q9H5Z1 703 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UGT1A7Q9HAW7 530 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UGT1A10Q9HAW8 530 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UGT1A8Q9HAW9 530 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FOLH1BQ9HBA9 442 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NT5MQ9NPB1 228 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 KIF25Q9UIL4 384 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NEU3Q9UQ49 428 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FAM215AQ9Y5M1 114 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 EXPH5Q8NEV8 1989 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IGKV1D-8A0A087WSZ0 117 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UQCRHLA0A096LP55 91 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV1-45A0A0A0MS14 117 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A0A1B0GVL5 298 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A0A1B0GX78 115 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PINLYPA6NC86 204 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 USP27XA6NNY8 438 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 H0Y9J4 135 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ABCD4O14678 606 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 TOX3O15405 576 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CLOCKO15516 846 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF208O43345 1280 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 KDELR3O43731 214 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CALUO43852 315 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 STX10O60499 249 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF780AO75290 641 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SUPT7LO94864 414 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DIRAS1O95057 198 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 STAMBPO95630 424 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 POU2F1P14859 743 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NCK1P16333 377 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms