RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TMEM268Q5VZI3 342 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 XRCC2O43543 280 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 NRASP01111 189 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 MBP02144 154 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 PI3P19957 117 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 DTYMKP23919 212 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 HMGA2P52926 109 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 AGBL4Q5VU57 503 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 LRP3O75074 770 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 PCMT1P22061 227 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 RBPJQ06330 500 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 SHBQ15464 509 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 LINC00696Q6ZRV3 163 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 SCCPDHQ8NBX0 429 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 CMBLQ96DG6 245 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 RAC1P63000 192 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 DHODHQ02127 395 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SPACA5Q96QH8 159 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 PYCARD-AS1I3L0S3 204 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 PLPP2O43688 288 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SSSCA1O60232 199 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 NDUFB6O95139 128 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 DMWDQ09019 674 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SLC35E1Q96K37 410 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 MED29Q9NX70 200 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SLC17A4Q9Y2C5 497 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 A0A087WUJ7 227 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SERTM2A0A1B0GWG4 89 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 AQP8O94778 261 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 CNIH1O95406 144 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 TOMM34Q15785 309 aaPredicted RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SSX1Q16384 188 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 VWA2Q5GFL6 755 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 CD300LDQ6UXZ3 194 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 ARRDC1Q8N5I2 433 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SOX7Q9BT81 388 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 CRLF2Q9HC73 371 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SIT1Q9Y3P8 196 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 EN2P19622 333 aaPredicted RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 G0S2P27469 103 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 C11orf87Q6NUJ2 197 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SLC23A1Q9UHI7 598 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 KCNE3Q9Y6H6 103 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 TAF1P21675 1872 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 F10P00742 488 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SLC25A1P53007 311 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 FZD2Q14332 565 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 ELFN2Q5R3F8 820 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 RPL7L1Q6DKI1 246 aaKnown RBP12.61□□□□□ -0.39
VTI1B-204ENST00000554659 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 SIGLEC7Q9Y286 467 aa12.61□□□□□ -0.39
VTI1B-204ENST00000554659 MEIKINA0A087WXM9 373 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 A0A0B4J2E0 115 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1B0GX12 115 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 SERPINE3A8MV23 424 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 WDR1O75083 606 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 KRTDAPP60985 99 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 LIMS2Q7Z4I7 341 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 OTOSQ8NHW6 89 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 RIMS4Q9H426 269 aaPredicted RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 LIN7CQ9NUP9 197 aaKnown RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1W2PR64 198 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ATF1P18846 271 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 F2RP25116 425 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 PPP2CBP62714 309 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 PPP2CAP67775 309 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 MAMSTRQ6ZN01 415 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 C12orf10Q9HB07 376 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 RAB18Q9NP72 206 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 IGHA2P01877 340 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 CXCL10P02778 98 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 OPRM1P35372 400 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms