RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 IL2RGP31785 369 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RAP1BP61224 184 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RAP1AP62834 184 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ERVK-25P63136 954 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 PSG4Q00888 419 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GALK2Q01415 458 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 HSF2Q03933 536 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GLO1Q04760 184 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 KRR1Q13601 381 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GGTLC2Q14390 218 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TRIP10Q15642 601 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CARTPTQ16568 116 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TBC1D28Q2M2D7 210 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 PABPC1L2AQ5JQF8 200 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 FGD3Q5JSP0 725 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SAMD4BQ5PRF9 694 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 THEM4Q5T1C6 240 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GKAP1Q5VSY0 366 aaPredicted RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 UGT2A3Q6UWM9 527 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 Q6ZTK2 550 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RFPL4BQ6ZWI9 263 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 OAFQ86UD1 273 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CYP4Z1Q86W10 505 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 HIPK1Q86Z02 1210 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF786Q8N393 782 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 LRRC18Q8N456 261 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ARIH2OSQ8N7S6 290 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 AKR7LQ8NHP1 331 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 FANK1Q8TC84 345 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 FNDC8Q8TC99 324 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GTF3AQ92664 365 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 YIPF5Q969M3 257 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RASD2Q96D21 266 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 PYURFQ96I23 114 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RSRC1Q96IZ7 334 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 POM121L2Q96KW2 1035 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 Q96M85 177 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF570Q96NI8 536 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 FOXN4Q96NZ1 517 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 BCL2L14Q9BZR8 327 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 OR2H1Q9GZK4 316 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 WNT5BQ9H1J7 359 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 OR51B6Q9H340 312 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 C1orf198Q9H425 327 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GORASP2Q9H8Y8 452 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 RNF121Q9H920 327 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SIAEQ9HAT2 523 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CDH20Q9HBT6 801 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CCNB1IP1Q9NPC3 277 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 POLE4Q9NR33 117 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM160Q9NX00 188 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ADA2Q9NZK5 511 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SAMD4AQ9UPU9 718 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SIGLEC7Q9Y286 467 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM5Q9Y2B1 443 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ARL2BPQ9Y2Y0 163 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 WNK2Q9Y3S1 2297 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 FBN1P35555 2871 aaKnown RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 IGLV1-36A0A0B4J1U3 117 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 TEX13CA0A0J9YWL9 993 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 IQCMA0A1B0GVH7 501 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 PRSS37A4D1T9 235 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 LRP5LA4QPB2 252 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 C17orf100A8MU93 164 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 LYNX1G3V0Z9 82 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 H3BSA7 217 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 WNT9BO14905 357 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 AHCYL1O43865 530 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 RP2O75695 350 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 DCTN3O75935 186 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 NDUFB2O95178 105 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 PPP1R3DO95685 299 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 PTHP01270 115 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ERCC1P07992 297 aaPredicted RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 LYNX1P0DP58 116 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 COX5BP10606 129 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 TCN1P20061 433 aaPredicted RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 COL8A2P25067 703 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 STOMP27105 288 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 RRM2P31350 389 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 APLNRP35414 380 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 RPL4P36578 427 aaKnown RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 MPV17P39210 176 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 MAGEA2P43356 314 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 MAGEB1P43366 347 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 GSSP48637 474 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 CDH15P55291 814 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 UCP2P55851 309 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 KLF3P57682 345 aaPredicted RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 MRPS11P82912 194 aaKnown RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 SPIBQ01892 262 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 KRT72Q14CN4 511 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 SGCAQ16586 387 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ALKBH6Q3KRA9 238 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZBED5Q49AG3 693 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 FAM27BQ5VT28 67 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 OTPQ5XKR4 325 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 CYB5R2Q6BCY4 276 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 GPR139Q6DWJ6 353 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF774Q6NX45 483 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms