RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 MFGE8Q08431 387 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-208ENST00000553868 GABRA6Q16445 453 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 ACSM3Q53FZ2 586 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF774Q6NX45 483 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 CEACAM19Q7Z692 300 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 NAXEQ8NCW5 288 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF799Q96GE5 643 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
SHMT2-208ENST00000553868 CENPOQ9BU64 300 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF879B4DU55 563 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 F5H5K5 113 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 RAD51DO75771 328 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 LYZL6O75951 148 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 ISG15P05161 165 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
SHMT2-208ENST00000553868 EPXP11678 715 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 ACHEP22303 614 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 CRYGSP22914 178 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 IL32P24001 234 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 MYL9P24844 172 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 KIR3DL2P43630 455 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 SLC6A9P48067 706 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 SERPINB10P48595 397 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-208ENST00000553868 RAB1AP62820 205 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 SPCS2Q15005 226 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 HIKESHIQ53FT3 197 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 SFRP5Q5T4F7 317 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 ELMOD2Q8IZ81 293 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 CCDC54Q8NEL0 328 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 OR52H1Q8NGJ2 320 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 AKR7LQ8NHP1 331 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 PGAM5Q96HS1 289 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 DCLRE1CQ96SD1 692 aaKnown RBP12.54□□□□□ -0.4
SHMT2-208ENST00000553868 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 DCSTAMPQ9H295 470 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 G6PC2Q9NQR9 355 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 AMDHD2Q9Y303 409 aa12.54□□□□□ -0.4
SHMT2-208ENST00000553868 A0A1B0GVI7 797 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 A0A1W2PPW3 197 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 TUBAL3A6NHL2 446 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
SHMT2-208ENST00000553868 SC5DO75845 299 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 IL1AP01583 271 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 CD2P06729 351 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF12P17014 697 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 BMP5P22003 454 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 Q499Y3 187 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 ZMAT1Q5H9K5 638 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 TMEM91Q6ZNR0 172 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 BHLHA15Q7RTS1 189 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-208ENST00000553868 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 MAPK1IP1LQ8NDC0 245 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 FGFBP3Q8TAT2 258 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
SHMT2-208ENST00000553868 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
SHMT2-208ENST00000553868 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 MED18Q9BUE0 208 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 OR10A2Q9H208 303 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF224Q9NZL3 707 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 DOCK7Q96N67 2140 aa12.53□□□□□ -0.4
SHMT2-208ENST00000553868 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 A8MXE2 369 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 OCM2P0CE71 109 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
SHMT2-208ENST00000553868 APLNRP35414 380 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 SOX6P35712 828 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 PEX19P40855 299 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 MTNR1BP49286 362 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 DGUOKQ16854 277 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 PRSS57Q6UWY2 283 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 UNQ9370/PRO34162Q6UXP9 181 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 FAM57BQ71RH2 274 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 TPRA1Q86W33 373 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 STEAP2Q8NFT2 490 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 OR1J2Q8NGS2 313 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 TRMT61AQ96FX7 289 aaKnown RBP12.52□□□□□ -0.41
SHMT2-208ENST00000553868 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 ZNF391Q9UJN7 358 aa12.52□□□□□ -0.41
SHMT2-208ENST00000553868 DHDHQ9UQ10 334 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms